Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Aph1bQ8C7N7 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Aph1bQ8C7N7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Aph1bQ8C7N7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Aph1bQ8C7N7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Aph1bQ8C7N7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Aph1bQ8C7N7 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.04□□□□□ -0.16
Aph1bQ8C7N7 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Aph1bQ8C7N7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Aph1bQ8C7N7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Aph1bQ8C7N7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Aph1bQ8C7N7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Gm14494-201ENSMUST00000118786 435 ntBASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Aph1bQ8C7N7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Aph1bQ8C7N7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Aph1bQ8C7N7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Aph1bQ8C7N7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Aph1bQ8C7N7 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.02□□□□□ -0.16
Aph1bQ8C7N7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Aph1bQ8C7N7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Aph1bQ8C7N7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Aph1bQ8C7N7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Gm15957-201ENSMUST00000118893 974 ntBASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Gm17271-201ENSMUST00000165535 355 ntBASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Aph1bQ8C7N7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Aph1bQ8C7N7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms