Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.68□□□□□ -0.54
Trim63Q38HM4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim63Q38HM4 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Trim63Q38HM4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim63Q38HM4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim63Q38HM4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim63Q38HM4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim63Q38HM4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim63Q38HM4 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim63Q38HM4 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim63Q38HM4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim63Q38HM4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim63Q38HM4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim63Q38HM4 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim63Q38HM4 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trim63Q38HM4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim63Q38HM4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim63Q38HM4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim63Q38HM4 Gm12085-201ENSMUST00000119263 940 ntBASIC11.66□□□□□ -0.54
Trim63Q38HM4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim63Q38HM4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim63Q38HM4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms