Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 AC092919.2-201ENST00000623631 1645 ntBASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 LINC00982-205ENST00000420957 435 ntBASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 FAM185BP-201ENST00000443595 716 ntBASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 AC012645.4-201ENST00000610691 1061 ntBASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 AC006116.8-202ENST00000587620 1550 ntBASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 AC108860.2-201ENST00000562760 2183 ntBASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 INGX-202ENST00000489074 768 ntBASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 AC093214.1-201ENST00000511688 1107 ntBASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 STK19B-204ENST00000512515 211 ntBASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 AC005225.4-201ENST00000557330 545 ntBASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 AC087641.1-201ENST00000557561 1021 ntBASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 AC109462.3-201ENST00000573934 613 ntBASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTC1Q2NKJ3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 AC084018.2-201ENST00000613093 2607 ntBASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 AC112191.1-201ENST00000523689 701 ntBASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 AC051619.7-201ENST00000568314 623 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms