Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPNS1P04632 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPNS1P04632 KRT18P27-201ENST00000427733 1299 ntBASIC17.1■□□□□ 0.33
CAPNS1P04632 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPNS1P04632 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.1■□□□□ 0.33
CAPNS1P04632 PAWRP1-201ENST00000451083 565 ntBASIC17.1■□□□□ 0.33
CAPNS1P04632 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPNS1P04632 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.1■□□□□ 0.33
CAPNS1P04632 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.1■□□□□ 0.33
CAPNS1P04632 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.1■□□□□ 0.33
CAPNS1P04632 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
CAPNS1P04632 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPNS1P04632 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CAPNS1P04632 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPNS1P04632 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPNS1P04632 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPNS1P04632 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPNS1P04632 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPNS1P04632 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CAPNS1P04632 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
CAPNS1P04632 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPNS1P04632 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CAPNS1P04632 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPNS1P04632 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CAPNS1P04632 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPNS1P04632 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.1■□□□□ 0.33
CAPNS1P04632 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPNS1P04632 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPNS1P04632 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPNS1P04632 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPNS1P04632 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPNS1P04632 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CAPNS1P04632 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CAPNS1P04632 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPNS1P04632 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPNS1P04632 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPNS1P04632 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPNS1P04632 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPNS1P04632 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPNS1P04632 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPNS1P04632 CROCCP2-202ENST00000412962 2773 ntBASIC17.09■□□□□ 0.33
CAPNS1P04632 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CAPNS1P04632 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPNS1P04632 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPNS1P04632 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPNS1P04632 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CAPNS1P04632 LAGE3P1-201ENST00000425356 484 ntBASIC17.09■□□□□ 0.33
CAPNS1P04632 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
CAPNS1P04632 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPNS1P04632 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPNS1P04632 AC027612.4-201ENST00000605371 583 ntBASIC17.09■□□□□ 0.33
CAPNS1P04632 AC092865.6-201ENST00000642101 219 ntBASIC17.09■□□□□ 0.33
CAPNS1P04632 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPNS1P04632 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPNS1P04632 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPNS1P04632 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPNS1P04632 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPNS1P04632 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPNS1P04632 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPNS1P04632 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CAPNS1P04632 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CAPNS1P04632 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
CAPNS1P04632 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPNS1P04632 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CAPNS1P04632 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CAPNS1P04632 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CAPNS1P04632 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CAPNS1P04632 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CAPNS1P04632 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CAPNS1P04632 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.08■□□□□ 0.33
CAPNS1P04632 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.08■□□□□ 0.33
CAPNS1P04632 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CAPNS1P04632 AL355312.1-201ENST00000407115 2176 ntBASIC17.08■□□□□ 0.33
CAPNS1P04632 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CAPNS1P04632 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.08■□□□□ 0.33
CAPNS1P04632 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CAPNS1P04632 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPNS1P04632 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPNS1P04632 AC002310.6-201ENST00000624451 1377 ntBASIC17.08■□□□□ 0.32
CAPNS1P04632 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPNS1P04632 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPNS1P04632 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPNS1P04632 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.08■□□□□ 0.32
CAPNS1P04632 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CAPNS1P04632 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CAPNS1P04632 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.08■□□□□ 0.32
CAPNS1P04632 MKNK2P1-201ENST00000437526 628 ntBASIC17.08■□□□□ 0.32
CAPNS1P04632 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.08■□□□□ 0.32
CAPNS1P04632 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.08■□□□□ 0.32
CAPNS1P04632 AC138761.1-201ENST00000584393 385 ntBASIC17.08■□□□□ 0.32
CAPNS1P04632 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
CAPNS1P04632 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.08■□□□□ 0.32
CAPNS1P04632 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CAPNS1P04632 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPNS1P04632 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CAPNS1P04632 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPNS1P04632 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.08■□□□□ 0.32
CAPNS1P04632 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
CAPNS1P04632 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CAPNS1P04632 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms