Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.23□□□□□ -0.61
Efnb3O35393 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Gm18733-201ENSMUST00000173950 856 ntBASIC11.23□□□□□ -0.61
Efnb3O35393 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.23□□□□□ -0.61
Efnb3O35393 Gm9182-201ENSMUST00000217829 639 ntBASIC11.23□□□□□ -0.61
Efnb3O35393 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.23□□□□□ -0.61
Efnb3O35393 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.23□□□□□ -0.61
Efnb3O35393 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.23□□□□□ -0.61
Efnb3O35393 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Efnb3O35393 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.23□□□□□ -0.61
Efnb3O35393 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Efnb3O35393 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.22□□□□□ -0.61
Efnb3O35393 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.22□□□□□ -0.61
Efnb3O35393 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Efnb3O35393 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.22□□□□□ -0.61
Efnb3O35393 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.22□□□□□ -0.61
Efnb3O35393 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Gm15173-201ENSMUST00000122049 433 ntBASIC11.22□□□□□ -0.61
Efnb3O35393 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.22□□□□□ -0.61
Efnb3O35393 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.22□□□□□ -0.61
Efnb3O35393 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.22□□□□□ -0.61
Efnb3O35393 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.22□□□□□ -0.61
Efnb3O35393 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.22□□□□□ -0.61
Efnb3O35393 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.22□□□□□ -0.61
Efnb3O35393 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.22□□□□□ -0.61
Efnb3O35393 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.22□□□□□ -0.61
Efnb3O35393 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Efnb3O35393 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Efnb3O35393 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Efnb3O35393 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.21□□□□□ -0.61
Efnb3O35393 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Efnb3O35393 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.21□□□□□ -0.61
Efnb3O35393 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Efnb3O35393 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.21□□□□□ -0.61
Efnb3O35393 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Efnb3O35393 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Efnb3O35393 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Efnb3O35393 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Efnb3O35393 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.21□□□□□ -0.61
Efnb3O35393 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.21□□□□□ -0.61
Efnb3O35393 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Efnb3O35393 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Efnb3O35393 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Efnb3O35393 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Efnb3O35393 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Efnb3O35393 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Efnb3O35393 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms