Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 AC004233.3-201ENST00000607794 1269 ntBASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LOC102724428A0A0B4J2F2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 MPDU1-223ENST00000582151 728 ntBASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 AL359881.2-201ENST00000602973 570 ntBASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 AC003101.2-201ENST00000612557 442 ntBASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 AC007967.4-201ENST00000614700 386 ntBASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 AC131009.4-201ENST00000624048 1740 ntBASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 AC012317.2-201ENST00000623305 2251 ntBASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 ABALON-201ENST00000629058 1903 ntBASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LOC102724428A0A0B4J2F2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 EGFEM1P-202ENST00000431685 1563 ntBASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 HNRNPA3P5-201ENST00000455201 833 ntBASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 AC105233.2-201ENST00000523697 349 ntBASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 AF228730.5-201ENST00000530288 346 ntBASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 AP001350.2-201ENST00000625104 1094 ntBASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.58■■□□□ 1.05
LOC102724428A0A0B4J2F2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LOC102724428A0A0B4J2F2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.58■■□□□ 1.04
LOC102724428A0A0B4J2F2 AL355312.1-201ENST00000407115 2176 ntBASIC21.58■■□□□ 1.04
LOC102724428A0A0B4J2F2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.58■■□□□ 1.04
LOC102724428A0A0B4J2F2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.58■■□□□ 1.04
LOC102724428A0A0B4J2F2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 AC073389.1-201ENST00000595595 795 ntBASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms