Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 PRELID1P1-202ENST00000567272 903 ntBASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 LINC01711-201ENST00000598340 967 ntBASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 AL355312.1-201ENST00000407115 2176 ntBASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 TSPY19P-201ENST00000418461 509 ntBASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 AC007967.3-201ENST00000434308 558 ntBASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 TSPY18P-201ENST00000441642 509 ntBASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 CLEC4GP1-201ENST00000596555 870 ntBASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLK4Q9HAZ1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 PCDHA1-201ENST00000378133 2726 ntBASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 FLJ38576-201ENST00000623820 2459 ntBASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 INTS4P1-201ENST00000438455 1935 ntBASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 MIR5100-201ENST00000579544 119 ntBASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLK4Q9HAZ1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms