Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 FAM197Y3-203ENST00000618346 717 ntBASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 AC107918.4-202ENST00000641623 219 ntBASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 AL023806.1-201ENST00000603994 1649 ntBASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 KRT18P3-201ENST00000451602 1288 ntBASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 AC092183.1-201ENST00000469884 875 ntBASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC33Q8N5R6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 AC004817.3-201ENST00000602957 2129 ntBASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 AC022211.2-201ENST00000585075 2527 ntBASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 UNC93B6-202ENST00000528242 690 ntBASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 AL691403.2-201ENST00000618460 490 ntBASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 AC055717.3-201ENST00000622967 595 ntBASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 AL049757.1-201ENST00000616842 1596 ntBASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC33Q8N5R6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 AC007967.2-201ENST00000432613 625 ntBASIC18.03■□□□□ 0.48
CCDC33Q8N5R6 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms