Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm7862-201ENSMUST00000121461 292 ntBASIC11.51□□□□□ -0.57
Sssca1P56873 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sssca1P56873 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.51□□□□□ -0.57
Sssca1P56873 Gm2272-201ENSMUST00000194903 582 ntBASIC11.51□□□□□ -0.57
Sssca1P56873 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.51□□□□□ -0.57
Sssca1P56873 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.51□□□□□ -0.57
Sssca1P56873 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sssca1P56873 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.51□□□□□ -0.57
Sssca1P56873 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.51□□□□□ -0.57
Sssca1P56873 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.51□□□□□ -0.57
Sssca1P56873 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.51□□□□□ -0.57
Sssca1P56873 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sssca1P56873 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Sssca1P56873 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sssca1P56873 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Sssca1P56873 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.5□□□□□ -0.57
Sssca1P56873 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.5□□□□□ -0.57
Sssca1P56873 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sssca1P56873 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.5□□□□□ -0.57
Sssca1P56873 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.5□□□□□ -0.57
Sssca1P56873 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sssca1P56873 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Sssca1P56873 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Sssca1P56873 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sssca1P56873 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.5□□□□□ -0.57
Sssca1P56873 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.5□□□□□ -0.57
Sssca1P56873 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sssca1P56873 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.49□□□□□ -0.57
Sssca1P56873 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sssca1P56873 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.49□□□□□ -0.57
Sssca1P56873 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Gm24589-201ENSMUST00000116692 94 ntBASIC11.49□□□□□ -0.57
Sssca1P56873 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Sssca1P56873 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sssca1P56873 Gm8584-201ENSMUST00000171982 758 ntBASIC11.49□□□□□ -0.57
Sssca1P56873 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.49□□□□□ -0.57
Sssca1P56873 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sssca1P56873 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Sssca1P56873 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sssca1P56873 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.48□□□□□ -0.57
Sssca1P56873 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms