Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CNOT3O75175 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
CNOT3O75175 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.75■□□□□ 0.27
CNOT3O75175 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT3O75175 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CNOT3O75175 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.74■□□□□ 0.27
CNOT3O75175 AC097374.2-201ENST00000618617 1306 ntBASIC16.74■□□□□ 0.27
CNOT3O75175 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CNOT3O75175 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CNOT3O75175 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.74■□□□□ 0.27
CNOT3O75175 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 AL031284.1-201ENST00000419297 478 ntBASIC16.74■□□□□ 0.27
CNOT3O75175 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CNOT3O75175 HNRNPDP1-201ENST00000439535 754 ntBASIC16.74■□□□□ 0.27
CNOT3O75175 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.74■□□□□ 0.27
CNOT3O75175 SART3-203ENST00000546611 1184 ntBASIC16.74■□□□□ 0.27
CNOT3O75175 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 AP001005.1-201ENST00000571755 1248 ntBASIC16.74■□□□□ 0.27
CNOT3O75175 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.74■□□□□ 0.27
CNOT3O75175 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.74■□□□□ 0.27
CNOT3O75175 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CNOT3O75175 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT3O75175 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.74■□□□□ 0.27
CNOT3O75175 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.73■□□□□ 0.27
CNOT3O75175 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CNOT3O75175 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.73■□□□□ 0.27
CNOT3O75175 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.73■□□□□ 0.27
CNOT3O75175 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.73■□□□□ 0.27
CNOT3O75175 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.73■□□□□ 0.27
CNOT3O75175 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.73■□□□□ 0.27
CNOT3O75175 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.73■□□□□ 0.27
CNOT3O75175 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.73■□□□□ 0.27
CNOT3O75175 AC096633.1-201ENST00000422446 749 ntBASIC16.73■□□□□ 0.27
CNOT3O75175 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.73■□□□□ 0.27
CNOT3O75175 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.73■□□□□ 0.27
CNOT3O75175 RNPS1P1-201ENST00000507437 918 ntBASIC16.73■□□□□ 0.27
CNOT3O75175 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.73■□□□□ 0.27
CNOT3O75175 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.73■□□□□ 0.27
CNOT3O75175 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.73■□□□□ 0.27
CNOT3O75175 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.73■□□□□ 0.27
CNOT3O75175 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.73■□□□□ 0.27
CNOT3O75175 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 MIR7706-201ENST00000613747 67 ntBASIC16.73■□□□□ 0.27
CNOT3O75175 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CNOT3O75175 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CNOT3O75175 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.73■□□□□ 0.27
CNOT3O75175 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CNOT3O75175 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CNOT3O75175 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CNOT3O75175 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT3O75175 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CNOT3O75175 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.72■□□□□ 0.27
CNOT3O75175 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.72■□□□□ 0.27
CNOT3O75175 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CNOT3O75175 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT3O75175 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms