Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.3■□□□□ 0.36
PKP3Q9Y446 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PKP3Q9Y446 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PKP3Q9Y446 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PKP3Q9Y446 NCF1C-201ENST00000438382 1427 ntBASIC17.3■□□□□ 0.36
PKP3Q9Y446 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PKP3Q9Y446 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PKP3Q9Y446 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.29■□□□□ 0.36
PKP3Q9Y446 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 AL121912.1-201ENST00000603683 238 ntBASIC17.29■□□□□ 0.36
PKP3Q9Y446 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.29■□□□□ 0.36
PKP3Q9Y446 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PKP3Q9Y446 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PKP3Q9Y446 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP3Q9Y446 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PKP3Q9Y446 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP3Q9Y446 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.28■□□□□ 0.36
PKP3Q9Y446 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PKP3Q9Y446 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PKP3Q9Y446 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP3Q9Y446 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP3Q9Y446 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.28■□□□□ 0.36
PKP3Q9Y446 LINC00982-205ENST00000420957 435 ntBASIC17.28■□□□□ 0.36
PKP3Q9Y446 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.28■□□□□ 0.36
PKP3Q9Y446 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PKP3Q9Y446 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.28■□□□□ 0.36
PKP3Q9Y446 AC073648.2-201ENST00000510116 352 ntBASIC17.28■□□□□ 0.36
PKP3Q9Y446 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.28■□□□□ 0.36
PKP3Q9Y446 AL589182.2-201ENST00000619332 1049 ntBASIC17.28■□□□□ 0.36
PKP3Q9Y446 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PKP3Q9Y446 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PKP3Q9Y446 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.28■□□□□ 0.36
PKP3Q9Y446 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP3Q9Y446 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.28■□□□□ 0.36
PKP3Q9Y446 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PKP3Q9Y446 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP3Q9Y446 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.28■□□□□ 0.36
PKP3Q9Y446 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP3Q9Y446 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PKP3Q9Y446 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PKP3Q9Y446 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PKP3Q9Y446 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.27■□□□□ 0.36
PKP3Q9Y446 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PKP3Q9Y446 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PKP3Q9Y446 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
PKP3Q9Y446 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PKP3Q9Y446 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PKP3Q9Y446 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PKP3Q9Y446 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PKP3Q9Y446 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PKP3Q9Y446 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PKP3Q9Y446 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.27■□□□□ 0.36
PKP3Q9Y446 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PKP3Q9Y446 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.27■□□□□ 0.36
PKP3Q9Y446 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.27■□□□□ 0.36
PKP3Q9Y446 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.27■□□□□ 0.36
PKP3Q9Y446 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PKP3Q9Y446 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms