Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT1Q9P2V4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRIT1Q9P2V4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 AC068137.2-201ENST00000605408 478 ntBASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 AL355385.1-201ENST00000606123 409 ntBASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 ACTL9-202ENST00000612068 1252 ntBASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 AC067852.2-201ENST00000590513 2313 ntBASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT1Q9P2V4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT1Q9P2V4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.58■□□□□ 0.25
LRIT1Q9P2V4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
LRIT1Q9P2V4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
LRIT1Q9P2V4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LRIT1Q9P2V4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.58■□□□□ 0.25
LRIT1Q9P2V4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
LRIT1Q9P2V4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
LRIT1Q9P2V4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms