Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ppp4r4Q8C0Y0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm5479-201ENSMUST00000160578 435 ntBASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm24158-201ENSMUST00000175263 71 ntBASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ppp4r4Q8C0Y0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm12134-201ENSMUST00000122109 520 ntBASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm7774-201ENSMUST00000200064 533 ntBASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ppp4r4Q8C0Y0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm2810-201ENSMUST00000118681 990 ntBASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm18737-201ENSMUST00000173594 937 ntBASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm5312-201ENSMUST00000203728 547 ntBASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ppp4r4Q8C0Y0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms