Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.97■□□□□ 0.79
SSRP1Q08945 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.97■□□□□ 0.79
SSRP1Q08945 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SSRP1Q08945 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.97■□□□□ 0.79
SSRP1Q08945 AL353135.1-201ENST00000606729 504 ntBASIC19.97■□□□□ 0.79
SSRP1Q08945 AL589182.2-201ENST00000619332 1049 ntBASIC19.97■□□□□ 0.79
SSRP1Q08945 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SSRP1Q08945 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSRP1Q08945 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.97■□□□□ 0.79
SSRP1Q08945 AL121761.2-201ENST00000598007 1648 ntBASIC19.97■□□□□ 0.79
SSRP1Q08945 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SSRP1Q08945 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.97■□□□□ 0.79
SSRP1Q08945 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSRP1Q08945 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.97■□□□□ 0.79
SSRP1Q08945 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SSRP1Q08945 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSRP1Q08945 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
SSRP1Q08945 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.96■□□□□ 0.79
SSRP1Q08945 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSRP1Q08945 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSRP1Q08945 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.96■□□□□ 0.79
SSRP1Q08945 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSRP1Q08945 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSRP1Q08945 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSRP1Q08945 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSRP1Q08945 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SSRP1Q08945 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.96■□□□□ 0.79
SSRP1Q08945 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SSRP1Q08945 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.96■□□□□ 0.79
SSRP1Q08945 AC124947.2-201ENST00000547118 1133 ntBASIC19.96■□□□□ 0.79
SSRP1Q08945 AC021087.4-201ENST00000563761 564 ntBASIC19.96■□□□□ 0.79
SSRP1Q08945 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.96■□□□□ 0.79
SSRP1Q08945 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SSRP1Q08945 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSRP1Q08945 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSRP1Q08945 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.96■□□□□ 0.79
SSRP1Q08945 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSRP1Q08945 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSRP1Q08945 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSRP1Q08945 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SSRP1Q08945 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.96■□□□□ 0.79
SSRP1Q08945 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSRP1Q08945 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
SSRP1Q08945 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
SSRP1Q08945 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SSRP1Q08945 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SSRP1Q08945 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SSRP1Q08945 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SSRP1Q08945 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 AL450487.1-201ENST00000426799 995 ntBASIC19.95■□□□□ 0.78
SSRP1Q08945 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.95■□□□□ 0.78
SSRP1Q08945 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.95■□□□□ 0.78
SSRP1Q08945 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.95■□□□□ 0.78
SSRP1Q08945 AC139887.3-201ENST00000568585 713 ntBASIC19.95■□□□□ 0.78
SSRP1Q08945 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.95■□□□□ 0.78
SSRP1Q08945 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.95■□□□□ 0.78
SSRP1Q08945 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.95■□□□□ 0.78
SSRP1Q08945 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.95■□□□□ 0.78
SSRP1Q08945 PRORSD1P-202ENST00000563365 2154 ntBASIC19.95■□□□□ 0.78
SSRP1Q08945 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SSRP1Q08945 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SSRP1Q08945 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 AL590787.1-201ENST00000568856 1315 ntBASIC19.95■□□□□ 0.78
SSRP1Q08945 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.95■□□□□ 0.78
SSRP1Q08945 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSRP1Q08945 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SSRP1Q08945 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.95■□□□□ 0.78
SSRP1Q08945 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
SSRP1Q08945 AD000864.1-201ENST00000624076 2295 ntBASIC19.95■□□□□ 0.78
SSRP1Q08945 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
SSRP1Q08945 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.94■□□□□ 0.78
SSRP1Q08945 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SSRP1Q08945 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSRP1Q08945 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.94■□□□□ 0.78
SSRP1Q08945 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSRP1Q08945 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.94■□□□□ 0.78
SSRP1Q08945 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSRP1Q08945 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSRP1Q08945 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSRP1Q08945 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.94■□□□□ 0.78
SSRP1Q08945 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSRP1Q08945 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSRP1Q08945 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSRP1Q08945 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.94■□□□□ 0.78
SSRP1Q08945 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms