Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
VARSP26640 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.99■□□□□ 0.31
VARSP26640 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
VARSP26640 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.98■□□□□ 0.31
VARSP26640 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VARSP26640 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VARSP26640 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.98■□□□□ 0.31
VARSP26640 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
VARSP26640 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.98■□□□□ 0.31
VARSP26640 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARSP26640 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARSP26640 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARSP26640 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VARSP26640 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
VARSP26640 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.98■□□□□ 0.31
VARSP26640 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
VARSP26640 AC005104.2-201ENST00000427818 678 ntBASIC16.98■□□□□ 0.31
VARSP26640 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.98■□□□□ 0.31
VARSP26640 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.98■□□□□ 0.31
VARSP26640 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VARSP26640 AC074051.2-201ENST00000565115 352 ntBASIC16.98■□□□□ 0.31
VARSP26640 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.98■□□□□ 0.31
VARSP26640 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.98■□□□□ 0.31
VARSP26640 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.98■□□□□ 0.31
VARSP26640 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.98■□□□□ 0.31
VARSP26640 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARSP26640 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARSP26640 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARSP26640 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.98■□□□□ 0.31
VARSP26640 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.98■□□□□ 0.31
VARSP26640 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
VARSP26640 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
VARSP26640 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARSP26640 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.98■□□□□ 0.31
VARSP26640 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.98■□□□□ 0.31
VARSP26640 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARSP26640 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARSP26640 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARSP26640 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VARSP26640 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VARSP26640 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 NSUN5P1-202ENST00000421140 1535 ntBASIC16.97■□□□□ 0.31
VARSP26640 NSUN5P2-203ENST00000457352 1529 ntBASIC16.97■□□□□ 0.31
VARSP26640 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.97■□□□□ 0.31
VARSP26640 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VARSP26640 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VARSP26640 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VARSP26640 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 MINOS1P3-201ENST00000457048 203 ntBASIC16.97■□□□□ 0.31
VARSP26640 EMBP1-201ENST00000458200 901 ntBASIC16.97■□□□□ 0.31
VARSP26640 KRT18P31-201ENST00000506277 1292 ntBASIC16.97■□□□□ 0.31
VARSP26640 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.97■□□□□ 0.31
VARSP26640 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.97■□□□□ 0.31
VARSP26640 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.97■□□□□ 0.31
VARSP26640 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.97■□□□□ 0.31
VARSP26640 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
VARSP26640 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 AL031008.1-201ENST00000619963 541 ntBASIC16.97■□□□□ 0.31
VARSP26640 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.97■□□□□ 0.31
VARSP26640 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
VARSP26640 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.97■□□□□ 0.31
VARSP26640 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARSP26640 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
VARSP26640 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VARSP26640 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.96■□□□□ 0.31
VARSP26640 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.96■□□□□ 0.31
VARSP26640 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.96■□□□□ 0.31
VARSP26640 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
VARSP26640 LYSMD4-203ENST00000378904 2122 ntBASIC16.96■□□□□ 0.31
VARSP26640 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VARSP26640 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VARSP26640 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.96■□□□□ 0.31
VARSP26640 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 STK33P1-201ENST00000423835 1218 ntBASIC16.96■□□□□ 0.31
VARSP26640 IGHV3-47-201ENST00000425060 335 ntBASIC16.96■□□□□ 0.31
VARSP26640 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.96■□□□□ 0.31
VARSP26640 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms