Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.16■□□□□ 0.34
PHGDHO43175 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.16■□□□□ 0.34
PHGDHO43175 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.16■□□□□ 0.34
PHGDHO43175 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.16■□□□□ 0.34
PHGDHO43175 AC009533.2-201ENST00000543664 586 ntBASIC17.16■□□□□ 0.34
PHGDHO43175 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.16■□□□□ 0.34
PHGDHO43175 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.16■□□□□ 0.34
PHGDHO43175 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
PHGDHO43175 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
PHGDHO43175 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PHGDHO43175 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PHGDHO43175 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.16■□□□□ 0.34
PHGDHO43175 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
PHGDHO43175 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.16■□□□□ 0.34
PHGDHO43175 AC092171.3-201ENST00000610122 2651 ntBASIC17.16■□□□□ 0.34
PHGDHO43175 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.16■□□□□ 0.34
PHGDHO43175 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 AC132938.5-201ENST00000624980 1813 ntBASIC17.16■□□□□ 0.34
PHGDHO43175 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
PHGDHO43175 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.16■□□□□ 0.34
PHGDHO43175 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.16■□□□□ 0.34
PHGDHO43175 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.16■□□□□ 0.34
PHGDHO43175 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.16■□□□□ 0.34
PHGDHO43175 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.16■□□□□ 0.34
PHGDHO43175 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PHGDHO43175 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.15■□□□□ 0.34
PHGDHO43175 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PHGDHO43175 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.15■□□□□ 0.34
PHGDHO43175 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PHGDHO43175 AC078925.2-201ENST00000624013 1973 ntBASIC17.15■□□□□ 0.34
PHGDHO43175 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PHGDHO43175 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.15■□□□□ 0.34
PHGDHO43175 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PHGDHO43175 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.15■□□□□ 0.34
PHGDHO43175 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PHGDHO43175 AL049597.2-201ENST00000565575 961 ntBASIC17.15■□□□□ 0.34
PHGDHO43175 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.15■□□□□ 0.34
PHGDHO43175 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.15■□□□□ 0.34
PHGDHO43175 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PHGDHO43175 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PHGDHO43175 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PHGDHO43175 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
PHGDHO43175 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 KRT18P1-202ENST00000452408 1331 ntBASIC17.15■□□□□ 0.34
PHGDHO43175 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.15■□□□□ 0.34
PHGDHO43175 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.15■□□□□ 0.34
PHGDHO43175 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHGDHO43175 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
PHGDHO43175 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHGDHO43175 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.14■□□□□ 0.33
PHGDHO43175 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.14■□□□□ 0.33
PHGDHO43175 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHGDHO43175 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHGDHO43175 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHGDHO43175 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHGDHO43175 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.14■□□□□ 0.33
PHGDHO43175 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHGDHO43175 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.14■□□□□ 0.33
PHGDHO43175 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.14■□□□□ 0.33
PHGDHO43175 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.14■□□□□ 0.33
PHGDHO43175 AC011467.2-201ENST00000598425 242 ntBASIC17.14■□□□□ 0.33
PHGDHO43175 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.14■□□□□ 0.33
PHGDHO43175 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHGDHO43175 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.14■□□□□ 0.33
PHGDHO43175 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHGDHO43175 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PHGDHO43175 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHGDHO43175 AL139384.1-201ENST00000612143 3047 ntBASIC17.14■□□□□ 0.33
PHGDHO43175 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHGDHO43175 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.14■□□□□ 0.33
PHGDHO43175 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PHGDHO43175 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PHGDHO43175 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHGDHO43175 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHGDHO43175 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PHGDHO43175 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PHGDHO43175 AC233702.3-201ENST00000578656 1387 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms