Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chchd1Q9CQA6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chchd1Q9CQA6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chchd1Q9CQA6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chchd1Q9CQA6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chchd1Q9CQA6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chchd1Q9CQA6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chchd1Q9CQA6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chchd1Q9CQA6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chchd1Q9CQA6 Iqck-206ENSMUST00000208658 2891 ntBASIC16.65■□□□□ 0.26
Chchd1Q9CQA6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Chchd1Q9CQA6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.65■□□□□ 0.26
Chchd1Q9CQA6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chchd1Q9CQA6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chchd1Q9CQA6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Chchd1Q9CQA6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chchd1Q9CQA6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chchd1Q9CQA6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chchd1Q9CQA6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.64■□□□□ 0.25
Chchd1Q9CQA6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chchd1Q9CQA6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chchd1Q9CQA6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chchd1Q9CQA6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chchd1Q9CQA6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chchd1Q9CQA6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chchd1Q9CQA6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chchd1Q9CQA6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.62■□□□□ 0.25
Chchd1Q9CQA6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chchd1Q9CQA6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chchd1Q9CQA6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.62■□□□□ 0.25
Chchd1Q9CQA6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chchd1Q9CQA6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chchd1Q9CQA6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chchd1Q9CQA6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Chchd1Q9CQA6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chchd1Q9CQA6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chchd1Q9CQA6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chchd1Q9CQA6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chchd1Q9CQA6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Chchd1Q9CQA6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chchd1Q9CQA6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Chchd1Q9CQA6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chchd1Q9CQA6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chchd1Q9CQA6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chchd1Q9CQA6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chchd1Q9CQA6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chchd1Q9CQA6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Chchd1Q9CQA6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chchd1Q9CQA6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chchd1Q9CQA6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chchd1Q9CQA6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Chchd1Q9CQA6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chchd1Q9CQA6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chchd1Q9CQA6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chchd1Q9CQA6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chchd1Q9CQA6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chchd1Q9CQA6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chchd1Q9CQA6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chchd1Q9CQA6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chchd1Q9CQA6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chchd1Q9CQA6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Chchd1Q9CQA6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.59■□□□□ 0.25
Chchd1Q9CQA6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Chchd1Q9CQA6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chchd1Q9CQA6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chchd1Q9CQA6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chchd1Q9CQA6 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.58■□□□□ 0.24
Chchd1Q9CQA6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chchd1Q9CQA6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chchd1Q9CQA6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Chchd1Q9CQA6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chchd1Q9CQA6 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.57■□□□□ 0.24
Chchd1Q9CQA6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chchd1Q9CQA6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.57■□□□□ 0.24
Chchd1Q9CQA6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chchd1Q9CQA6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chchd1Q9CQA6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chchd1Q9CQA6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chchd1Q9CQA6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.57■□□□□ 0.24
Chchd1Q9CQA6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chchd1Q9CQA6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chchd1Q9CQA6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.56■□□□□ 0.24
Chchd1Q9CQA6 Peli2-204ENSMUST00000226513 1320 ntBASIC16.56■□□□□ 0.24
Chchd1Q9CQA6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chchd1Q9CQA6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chchd1Q9CQA6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chchd1Q9CQA6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Chchd1Q9CQA6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Chchd1Q9CQA6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chchd1Q9CQA6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chchd1Q9CQA6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chchd1Q9CQA6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chchd1Q9CQA6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.55■□□□□ 0.24
Chchd1Q9CQA6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Chchd1Q9CQA6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chchd1Q9CQA6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.55■□□□□ 0.24
Chchd1Q9CQA6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chchd1Q9CQA6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chchd1Q9CQA6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chchd1Q9CQA6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms