Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scrt1Q99M85 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scrt1Q99M85 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.19■□□□□ 0.66
Scrt1Q99M85 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Scrt1Q99M85 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Scrt1Q99M85 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scrt1Q99M85 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scrt1Q99M85 Etf1-202ENSMUST00000180351 108 ntBASIC19.18■□□□□ 0.66
Scrt1Q99M85 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.18■□□□□ 0.66
Scrt1Q99M85 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scrt1Q99M85 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Scrt1Q99M85 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scrt1Q99M85 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scrt1Q99M85 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.17■□□□□ 0.66
Scrt1Q99M85 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scrt1Q99M85 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scrt1Q99M85 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scrt1Q99M85 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scrt1Q99M85 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.16■□□□□ 0.66
Scrt1Q99M85 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.15■□□□□ 0.66
Scrt1Q99M85 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
Scrt1Q99M85 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scrt1Q99M85 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scrt1Q99M85 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scrt1Q99M85 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Scrt1Q99M85 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scrt1Q99M85 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.14■□□□□ 0.65
Scrt1Q99M85 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.14■□□□□ 0.65
Scrt1Q99M85 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.14■□□□□ 0.65
Scrt1Q99M85 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scrt1Q99M85 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scrt1Q99M85 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scrt1Q99M85 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scrt1Q99M85 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scrt1Q99M85 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scrt1Q99M85 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.14■□□□□ 0.65
Scrt1Q99M85 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scrt1Q99M85 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Scrt1Q99M85 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.13■□□□□ 0.65
Scrt1Q99M85 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scrt1Q99M85 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scrt1Q99M85 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scrt1Q99M85 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Scrt1Q99M85 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scrt1Q99M85 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scrt1Q99M85 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scrt1Q99M85 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.12■□□□□ 0.65
Scrt1Q99M85 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scrt1Q99M85 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scrt1Q99M85 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scrt1Q99M85 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.12■□□□□ 0.65
Scrt1Q99M85 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scrt1Q99M85 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scrt1Q99M85 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Scrt1Q99M85 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.11■□□□□ 0.65
Scrt1Q99M85 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scrt1Q99M85 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scrt1Q99M85 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Scrt1Q99M85 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scrt1Q99M85 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scrt1Q99M85 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Scrt1Q99M85 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.11■□□□□ 0.65
Scrt1Q99M85 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scrt1Q99M85 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scrt1Q99M85 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Scrt1Q99M85 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scrt1Q99M85 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scrt1Q99M85 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Scrt1Q99M85 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Scrt1Q99M85 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Scrt1Q99M85 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.09■□□□□ 0.65
Scrt1Q99M85 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Scrt1Q99M85 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.09■□□□□ 0.65
Scrt1Q99M85 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scrt1Q99M85 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scrt1Q99M85 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scrt1Q99M85 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scrt1Q99M85 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
Scrt1Q99M85 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scrt1Q99M85 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Scrt1Q99M85 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Scrt1Q99M85 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Scrt1Q99M85 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scrt1Q99M85 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scrt1Q99M85 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.07■□□□□ 0.64
Scrt1Q99M85 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scrt1Q99M85 Gm10232-201ENSMUST00000089221 720 ntBASIC19.07■□□□□ 0.64
Scrt1Q99M85 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Scrt1Q99M85 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scrt1Q99M85 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.06■□□□□ 0.64
Scrt1Q99M85 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scrt1Q99M85 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scrt1Q99M85 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scrt1Q99M85 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scrt1Q99M85 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Scrt1Q99M85 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scrt1Q99M85 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scrt1Q99M85 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Scrt1Q99M85 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.05■□□□□ 0.64
Scrt1Q99M85 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms