Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhga6Q91XY2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhga6Q91XY2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhga6Q91XY2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhga6Q91XY2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pcdhga6Q91XY2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Pcdhga6Q91XY2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhga6Q91XY2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdhga6Q91XY2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga6Q91XY2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga6Q91XY2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Pcdhga6Q91XY2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.66■■□□□ 1.06
Pcdhga6Q91XY2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga6Q91XY2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga6Q91XY2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga6Q91XY2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhga6Q91XY2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga6Q91XY2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga6Q91XY2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga6Q91XY2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga6Q91XY2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhga6Q91XY2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhga6Q91XY2 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.64■■□□□ 1.06
Pcdhga6Q91XY2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Pcdhga6Q91XY2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga6Q91XY2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga6Q91XY2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga6Q91XY2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.64■■□□□ 1.05
Pcdhga6Q91XY2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga6Q91XY2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga6Q91XY2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga6Q91XY2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhga6Q91XY2 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.63■■□□□ 1.05
Pcdhga6Q91XY2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga6Q91XY2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.62■■□□□ 1.05
Pcdhga6Q91XY2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.62■■□□□ 1.05
Pcdhga6Q91XY2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga6Q91XY2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.62■■□□□ 1.05
Pcdhga6Q91XY2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga6Q91XY2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Pcdhga6Q91XY2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.62■■□□□ 1.05
Pcdhga6Q91XY2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.62■■□□□ 1.05
Pcdhga6Q91XY2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhga6Q91XY2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhga6Q91XY2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.61■■□□□ 1.05
Pcdhga6Q91XY2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.6■■□□□ 1.05
Pcdhga6Q91XY2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhga6Q91XY2 Gm7417-201ENSMUST00000192950 473 ntBASIC21.6■■□□□ 1.05
Pcdhga6Q91XY2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhga6Q91XY2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga6Q91XY2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga6Q91XY2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga6Q91XY2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga6Q91XY2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga6Q91XY2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Pcdhga6Q91XY2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhga6Q91XY2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhga6Q91XY2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
Pcdhga6Q91XY2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.58■■□□□ 1.05
Pcdhga6Q91XY2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhga6Q91XY2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhga6Q91XY2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhga6Q91XY2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.57■■□□□ 1.04
Pcdhga6Q91XY2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhga6Q91XY2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga6Q91XY2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.56■■□□□ 1.04
Pcdhga6Q91XY2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.56■■□□□ 1.04
Pcdhga6Q91XY2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhga6Q91XY2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pcdhga6Q91XY2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhga6Q91XY2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga6Q91XY2 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.55■■□□□ 1.04
Pcdhga6Q91XY2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdhga6Q91XY2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga6Q91XY2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga6Q91XY2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga6Q91XY2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga6Q91XY2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga6Q91XY2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga6Q91XY2 Gm9847-201ENSMUST00000052528 599 ntBASIC21.54■■□□□ 1.04
Pcdhga6Q91XY2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga6Q91XY2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.53■■□□□ 1.04
Pcdhga6Q91XY2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhga6Q91XY2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga6Q91XY2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga6Q91XY2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga6Q91XY2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga6Q91XY2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhga6Q91XY2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhga6Q91XY2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhga6Q91XY2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.52■■□□□ 1.04
Pcdhga6Q91XY2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhga6Q91XY2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhga6Q91XY2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhga6Q91XY2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhga6Q91XY2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga6Q91XY2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga6Q91XY2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga6Q91XY2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Pcdhga6Q91XY2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms