Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rft1Q8C3B8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rft1Q8C3B8 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.35■□□□□ 0.69
Rft1Q8C3B8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rft1Q8C3B8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Rft1Q8C3B8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rft1Q8C3B8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rft1Q8C3B8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rft1Q8C3B8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.34■□□□□ 0.69
Rft1Q8C3B8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.33■□□□□ 0.69
Rft1Q8C3B8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rft1Q8C3B8 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.33■□□□□ 0.69
Rft1Q8C3B8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Rft1Q8C3B8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
Rft1Q8C3B8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rft1Q8C3B8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.33■□□□□ 0.68
Rft1Q8C3B8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rft1Q8C3B8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rft1Q8C3B8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rft1Q8C3B8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rft1Q8C3B8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rft1Q8C3B8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rft1Q8C3B8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rft1Q8C3B8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rft1Q8C3B8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rft1Q8C3B8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rft1Q8C3B8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.32■□□□□ 0.68
Rft1Q8C3B8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rft1Q8C3B8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rft1Q8C3B8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rft1Q8C3B8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rft1Q8C3B8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rft1Q8C3B8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rft1Q8C3B8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Rft1Q8C3B8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.31■□□□□ 0.68
Rft1Q8C3B8 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.31■□□□□ 0.68
Rft1Q8C3B8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.31■□□□□ 0.68
Rft1Q8C3B8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rft1Q8C3B8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.31■□□□□ 0.68
Rft1Q8C3B8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rft1Q8C3B8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rft1Q8C3B8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rft1Q8C3B8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rft1Q8C3B8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rft1Q8C3B8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rft1Q8C3B8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rft1Q8C3B8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rft1Q8C3B8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rft1Q8C3B8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rft1Q8C3B8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rft1Q8C3B8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rft1Q8C3B8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rft1Q8C3B8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rft1Q8C3B8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rft1Q8C3B8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rft1Q8C3B8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.29■□□□□ 0.68
Rft1Q8C3B8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rft1Q8C3B8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rft1Q8C3B8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.28■□□□□ 0.68
Rft1Q8C3B8 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.28■□□□□ 0.68
Rft1Q8C3B8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rft1Q8C3B8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rft1Q8C3B8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rft1Q8C3B8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rft1Q8C3B8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rft1Q8C3B8 Gm45364-201ENSMUST00000210883 159 ntBASIC19.27■□□□□ 0.68
Rft1Q8C3B8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rft1Q8C3B8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rft1Q8C3B8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rft1Q8C3B8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rft1Q8C3B8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rft1Q8C3B8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rft1Q8C3B8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rft1Q8C3B8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rft1Q8C3B8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rft1Q8C3B8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rft1Q8C3B8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rft1Q8C3B8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rft1Q8C3B8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rft1Q8C3B8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rft1Q8C3B8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rft1Q8C3B8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rft1Q8C3B8 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.25■□□□□ 0.67
Rft1Q8C3B8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rft1Q8C3B8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rft1Q8C3B8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rft1Q8C3B8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rft1Q8C3B8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rft1Q8C3B8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rft1Q8C3B8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rft1Q8C3B8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rft1Q8C3B8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rft1Q8C3B8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rft1Q8C3B8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rft1Q8C3B8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rft1Q8C3B8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rft1Q8C3B8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rft1Q8C3B8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rft1Q8C3B8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rft1Q8C3B8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms