Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.46■□□□□ 0.87
Cpne1Q8C166 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpne1Q8C166 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpne1Q8C166 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Cpne1Q8C166 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.45■□□□□ 0.86
Cpne1Q8C166 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Cpne1Q8C166 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpne1Q8C166 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.45■□□□□ 0.86
Cpne1Q8C166 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.45■□□□□ 0.86
Cpne1Q8C166 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpne1Q8C166 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
Cpne1Q8C166 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpne1Q8C166 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Cpne1Q8C166 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpne1Q8C166 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpne1Q8C166 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpne1Q8C166 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cpne1Q8C166 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpne1Q8C166 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cpne1Q8C166 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.44■□□□□ 0.86
Cpne1Q8C166 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cpne1Q8C166 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cpne1Q8C166 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpne1Q8C166 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Cpne1Q8C166 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpne1Q8C166 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Cpne1Q8C166 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpne1Q8C166 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpne1Q8C166 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpne1Q8C166 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpne1Q8C166 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cpne1Q8C166 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cpne1Q8C166 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpne1Q8C166 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpne1Q8C166 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpne1Q8C166 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.42■□□□□ 0.86
Cpne1Q8C166 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpne1Q8C166 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpne1Q8C166 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.41■□□□□ 0.86
Cpne1Q8C166 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpne1Q8C166 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpne1Q8C166 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpne1Q8C166 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpne1Q8C166 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.41■□□□□ 0.86
Cpne1Q8C166 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cpne1Q8C166 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cpne1Q8C166 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cpne1Q8C166 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cpne1Q8C166 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpne1Q8C166 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cpne1Q8C166 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpne1Q8C166 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpne1Q8C166 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cpne1Q8C166 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cpne1Q8C166 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cpne1Q8C166 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cpne1Q8C166 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpne1Q8C166 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cpne1Q8C166 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cpne1Q8C166 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cpne1Q8C166 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cpne1Q8C166 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cpne1Q8C166 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Cpne1Q8C166 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpne1Q8C166 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpne1Q8C166 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpne1Q8C166 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.37■□□□□ 0.85
Cpne1Q8C166 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.37■□□□□ 0.85
Cpne1Q8C166 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne1Q8C166 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne1Q8C166 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne1Q8C166 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne1Q8C166 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Cpne1Q8C166 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne1Q8C166 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.35■□□□□ 0.85
Cpne1Q8C166 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpne1Q8C166 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpne1Q8C166 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpne1Q8C166 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpne1Q8C166 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpne1Q8C166 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cpne1Q8C166 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cpne1Q8C166 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cpne1Q8C166 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.33■□□□□ 0.85
Cpne1Q8C166 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cpne1Q8C166 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.33■□□□□ 0.84
Cpne1Q8C166 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cpne1Q8C166 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne1Q8C166 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Cpne1Q8C166 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.32■□□□□ 0.84
Cpne1Q8C166 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne1Q8C166 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne1Q8C166 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.31■□□□□ 0.84
Cpne1Q8C166 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cpne1Q8C166 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne1Q8C166 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne1Q8C166 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne1Q8C166 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne1Q8C166 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.3■□□□□ 0.84
Cpne1Q8C166 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms