Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm12821-201ENSMUST00000120022 600 ntBASIC19.04■□□□□ 0.64
Smg1Q8BKX6 Gm7417-201ENSMUST00000192950 473 ntBASIC19.04■□□□□ 0.64
Smg1Q8BKX6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smg1Q8BKX6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Smg1Q8BKX6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smg1Q8BKX6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smg1Q8BKX6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smg1Q8BKX6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.03■□□□□ 0.64
Smg1Q8BKX6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smg1Q8BKX6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.02■□□□□ 0.64
Smg1Q8BKX6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.02■□□□□ 0.64
Smg1Q8BKX6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.02■□□□□ 0.64
Smg1Q8BKX6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smg1Q8BKX6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smg1Q8BKX6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.02■□□□□ 0.64
Smg1Q8BKX6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smg1Q8BKX6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Smg1Q8BKX6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Smg1Q8BKX6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
Smg1Q8BKX6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.01■□□□□ 0.63
Smg1Q8BKX6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.01■□□□□ 0.63
Smg1Q8BKX6 Golgb1-201ENSMUST00000023534 498 ntBASIC19.01■□□□□ 0.63
Smg1Q8BKX6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smg1Q8BKX6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smg1Q8BKX6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smg1Q8BKX6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smg1Q8BKX6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smg1Q8BKX6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Smg1Q8BKX6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smg1Q8BKX6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smg1Q8BKX6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smg1Q8BKX6 Gm18284-201ENSMUST00000172604 624 ntBASIC18.99■□□□□ 0.63
Smg1Q8BKX6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smg1Q8BKX6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.99■□□□□ 0.63
Smg1Q8BKX6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
Smg1Q8BKX6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smg1Q8BKX6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Smg1Q8BKX6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smg1Q8BKX6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smg1Q8BKX6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.99■□□□□ 0.63
Smg1Q8BKX6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.99■□□□□ 0.63
Smg1Q8BKX6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smg1Q8BKX6 Gm22238-201ENSMUST00000175222 88 ntBASIC18.99■□□□□ 0.63
Smg1Q8BKX6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.98■□□□□ 0.63
Smg1Q8BKX6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smg1Q8BKX6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.98■□□□□ 0.63
Smg1Q8BKX6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smg1Q8BKX6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Smg1Q8BKX6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smg1Q8BKX6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smg1Q8BKX6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smg1Q8BKX6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.97■□□□□ 0.63
Smg1Q8BKX6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
Smg1Q8BKX6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smg1Q8BKX6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smg1Q8BKX6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smg1Q8BKX6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smg1Q8BKX6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smg1Q8BKX6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smg1Q8BKX6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smg1Q8BKX6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Smg1Q8BKX6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smg1Q8BKX6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smg1Q8BKX6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smg1Q8BKX6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smg1Q8BKX6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smg1Q8BKX6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smg1Q8BKX6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smg1Q8BKX6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smg1Q8BKX6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
Smg1Q8BKX6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.93■□□□□ 0.62
Smg1Q8BKX6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smg1Q8BKX6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smg1Q8BKX6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smg1Q8BKX6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smg1Q8BKX6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Smg1Q8BKX6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.92■□□□□ 0.62
Smg1Q8BKX6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.92■□□□□ 0.62
Smg1Q8BKX6 Gm45417-201ENSMUST00000209533 758 ntBASIC18.92■□□□□ 0.62
Smg1Q8BKX6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Smg1Q8BKX6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Smg1Q8BKX6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Smg1Q8BKX6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.92■□□□□ 0.62
Smg1Q8BKX6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smg1Q8BKX6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smg1Q8BKX6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.91■□□□□ 0.62
Smg1Q8BKX6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smg1Q8BKX6 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.91■□□□□ 0.62
Smg1Q8BKX6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.91■□□□□ 0.62
Smg1Q8BKX6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smg1Q8BKX6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Smg1Q8BKX6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smg1Q8BKX6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smg1Q8BKX6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smg1Q8BKX6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.9■□□□□ 0.62
Smg1Q8BKX6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.9■□□□□ 0.62
Smg1Q8BKX6 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.9■□□□□ 0.62
Smg1Q8BKX6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.9■□□□□ 0.62
Smg1Q8BKX6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Smg1Q8BKX6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.89■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms