Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Rfx4Q7TNK1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx4Q7TNK1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx4Q7TNK1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx4Q7TNK1 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.99■□□□□ 0.95
Rfx4Q7TNK1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
Rfx4Q7TNK1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.98■□□□□ 0.95
Rfx4Q7TNK1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.98■□□□□ 0.95
Rfx4Q7TNK1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx4Q7TNK1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx4Q7TNK1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx4Q7TNK1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx4Q7TNK1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx4Q7TNK1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx4Q7TNK1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx4Q7TNK1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx4Q7TNK1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rfx4Q7TNK1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx4Q7TNK1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.96■□□□□ 0.95
Rfx4Q7TNK1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx4Q7TNK1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx4Q7TNK1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx4Q7TNK1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rfx4Q7TNK1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx4Q7TNK1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx4Q7TNK1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx4Q7TNK1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx4Q7TNK1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx4Q7TNK1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rfx4Q7TNK1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx4Q7TNK1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Rfx4Q7TNK1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.94■□□□□ 0.94
Rfx4Q7TNK1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx4Q7TNK1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx4Q7TNK1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rfx4Q7TNK1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx4Q7TNK1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Rfx4Q7TNK1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx4Q7TNK1 Nkain2-201ENSMUST00000092602 558 ntBASIC20.93■□□□□ 0.94
Rfx4Q7TNK1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx4Q7TNK1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rfx4Q7TNK1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.92■□□□□ 0.94
Rfx4Q7TNK1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx4Q7TNK1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx4Q7TNK1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx4Q7TNK1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx4Q7TNK1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx4Q7TNK1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx4Q7TNK1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rfx4Q7TNK1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx4Q7TNK1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx4Q7TNK1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rfx4Q7TNK1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx4Q7TNK1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx4Q7TNK1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.89■□□□□ 0.94
Rfx4Q7TNK1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rfx4Q7TNK1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rfx4Q7TNK1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rfx4Q7TNK1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx4Q7TNK1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx4Q7TNK1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx4Q7TNK1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx4Q7TNK1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx4Q7TNK1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx4Q7TNK1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx4Q7TNK1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
Rfx4Q7TNK1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rfx4Q7TNK1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx4Q7TNK1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
Rfx4Q7TNK1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx4Q7TNK1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx4Q7TNK1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx4Q7TNK1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx4Q7TNK1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx4Q7TNK1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx4Q7TNK1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx4Q7TNK1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx4Q7TNK1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Rfx4Q7TNK1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx4Q7TNK1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rfx4Q7TNK1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx4Q7TNK1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx4Q7TNK1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rfx4Q7TNK1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rfx4Q7TNK1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx4Q7TNK1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx4Q7TNK1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.85■□□□□ 0.93
Rfx4Q7TNK1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx4Q7TNK1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.85■□□□□ 0.93
Rfx4Q7TNK1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.85■□□□□ 0.93
Rfx4Q7TNK1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx4Q7TNK1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx4Q7TNK1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx4Q7TNK1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.84■□□□□ 0.93
Rfx4Q7TNK1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.84■□□□□ 0.93
Rfx4Q7TNK1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rfx4Q7TNK1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx4Q7TNK1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Rfx4Q7TNK1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx4Q7TNK1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms