Protein–RNA interactions for Protein: Q6PHN9

Rab35, Ras-related protein Rab-35, mousemouse

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab35Q6PHN9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rab35Q6PHN9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab35Q6PHN9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab35Q6PHN9 Gm44428-201ENSMUST00000204474 874 ntBASIC19.26■□□□□ 0.67
Rab35Q6PHN9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab35Q6PHN9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rab35Q6PHN9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab35Q6PHN9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.25■□□□□ 0.67
Rab35Q6PHN9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rab35Q6PHN9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rab35Q6PHN9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.24■□□□□ 0.67
Rab35Q6PHN9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab35Q6PHN9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab35Q6PHN9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab35Q6PHN9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rab35Q6PHN9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab35Q6PHN9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab35Q6PHN9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab35Q6PHN9 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.23■□□□□ 0.67
Rab35Q6PHN9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab35Q6PHN9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab35Q6PHN9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.23■□□□□ 0.67
Rab35Q6PHN9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab35Q6PHN9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab35Q6PHN9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab35Q6PHN9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab35Q6PHN9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.22■□□□□ 0.67
Rab35Q6PHN9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab35Q6PHN9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rab35Q6PHN9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab35Q6PHN9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab35Q6PHN9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.21■□□□□ 0.67
Rab35Q6PHN9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rab35Q6PHN9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab35Q6PHN9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.21■□□□□ 0.67
Rab35Q6PHN9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab35Q6PHN9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab35Q6PHN9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rab35Q6PHN9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab35Q6PHN9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.21■□□□□ 0.67
Rab35Q6PHN9 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.2■□□□□ 0.66
Rab35Q6PHN9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.2■□□□□ 0.66
Rab35Q6PHN9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.2■□□□□ 0.66
Rab35Q6PHN9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rab35Q6PHN9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab35Q6PHN9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rab35Q6PHN9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Rab35Q6PHN9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab35Q6PHN9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rab35Q6PHN9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab35Q6PHN9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.19■□□□□ 0.66
Rab35Q6PHN9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab35Q6PHN9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.18■□□□□ 0.66
Rab35Q6PHN9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab35Q6PHN9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab35Q6PHN9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.18■□□□□ 0.66
Rab35Q6PHN9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.18■□□□□ 0.66
Rab35Q6PHN9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab35Q6PHN9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rab35Q6PHN9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rab35Q6PHN9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rab35Q6PHN9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab35Q6PHN9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.17■□□□□ 0.66
Rab35Q6PHN9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rab35Q6PHN9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rab35Q6PHN9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab35Q6PHN9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab35Q6PHN9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab35Q6PHN9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.16■□□□□ 0.66
Rab35Q6PHN9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rab35Q6PHN9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab35Q6PHN9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab35Q6PHN9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rab35Q6PHN9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab35Q6PHN9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab35Q6PHN9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rab35Q6PHN9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab35Q6PHN9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab35Q6PHN9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rab35Q6PHN9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rab35Q6PHN9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rab35Q6PHN9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rab35Q6PHN9 Gm10420-201ENSMUST00000121713 882 ntBASIC19.14■□□□□ 0.65
Rab35Q6PHN9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab35Q6PHN9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab35Q6PHN9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab35Q6PHN9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.13■□□□□ 0.65
Rab35Q6PHN9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab35Q6PHN9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab35Q6PHN9 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.13■□□□□ 0.65
Rab35Q6PHN9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab35Q6PHN9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.13■□□□□ 0.65
Rab35Q6PHN9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rab35Q6PHN9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab35Q6PHN9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rab35Q6PHN9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Rab35Q6PHN9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rab35Q6PHN9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab35Q6PHN9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab35Q6PHN9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms