Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 AC140930.3-201ENSMUST00000222935 274 ntBASIC24.6■■□□□ 1.53
ShbQ6PD21 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.6■■□□□ 1.53
ShbQ6PD21 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ShbQ6PD21 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.59■■□□□ 1.53
ShbQ6PD21 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.59■■□□□ 1.53
ShbQ6PD21 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.59■■□□□ 1.53
ShbQ6PD21 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
ShbQ6PD21 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ShbQ6PD21 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
ShbQ6PD21 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
ShbQ6PD21 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
ShbQ6PD21 Gm12821-201ENSMUST00000120022 600 ntBASIC24.57■■□□□ 1.52
ShbQ6PD21 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
ShbQ6PD21 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.57■■□□□ 1.52
ShbQ6PD21 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ShbQ6PD21 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ShbQ6PD21 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ShbQ6PD21 Gm27454-201ENSMUST00000185090 204 ntBASIC24.56■■□□□ 1.52
ShbQ6PD21 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ShbQ6PD21 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ShbQ6PD21 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ShbQ6PD21 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.54■■□□□ 1.52
ShbQ6PD21 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ShbQ6PD21 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
ShbQ6PD21 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
ShbQ6PD21 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ShbQ6PD21 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ShbQ6PD21 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC24.53■■□□□ 1.52
ShbQ6PD21 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
ShbQ6PD21 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.52■■□□□ 1.52
ShbQ6PD21 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.51■■□□□ 1.51
ShbQ6PD21 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
ShbQ6PD21 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ShbQ6PD21 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
ShbQ6PD21 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC24.51■■□□□ 1.51
ShbQ6PD21 Gm45417-201ENSMUST00000209533 758 ntBASIC24.51■■□□□ 1.51
ShbQ6PD21 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ShbQ6PD21 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ShbQ6PD21 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.51■■□□□ 1.51
ShbQ6PD21 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ShbQ6PD21 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ShbQ6PD21 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.5■■□□□ 1.51
ShbQ6PD21 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.5■■□□□ 1.51
ShbQ6PD21 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
ShbQ6PD21 Gm28536-201ENSMUST00000190971 1317 ntBASIC24.5■■□□□ 1.51
ShbQ6PD21 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ShbQ6PD21 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
ShbQ6PD21 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
ShbQ6PD21 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
ShbQ6PD21 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
ShbQ6PD21 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
ShbQ6PD21 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
ShbQ6PD21 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ShbQ6PD21 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
ShbQ6PD21 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
ShbQ6PD21 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ShbQ6PD21 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ShbQ6PD21 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ShbQ6PD21 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ShbQ6PD21 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
ShbQ6PD21 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24.45■■□□□ 1.5
ShbQ6PD21 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ShbQ6PD21 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ShbQ6PD21 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC24.44■■□□□ 1.5
ShbQ6PD21 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC24.44■■□□□ 1.5
ShbQ6PD21 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ShbQ6PD21 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
ShbQ6PD21 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ShbQ6PD21 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ShbQ6PD21 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ShbQ6PD21 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ShbQ6PD21 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC24.42■■□□□ 1.5
ShbQ6PD21 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ShbQ6PD21 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ShbQ6PD21 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
ShbQ6PD21 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC24.41■■□□□ 1.5
ShbQ6PD21 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ShbQ6PD21 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ShbQ6PD21 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ShbQ6PD21 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
ShbQ6PD21 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ShbQ6PD21 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ShbQ6PD21 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ShbQ6PD21 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
ShbQ6PD21 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.39■■□□□ 1.49
ShbQ6PD21 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ShbQ6PD21 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.39■■□□□ 1.49
ShbQ6PD21 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ShbQ6PD21 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC24.38■■□□□ 1.49
ShbQ6PD21 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ShbQ6PD21 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.37■■□□□ 1.49
ShbQ6PD21 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC24.37■■□□□ 1.49
ShbQ6PD21 Gm8495-201ENSMUST00000188740 694 ntBASIC24.37■■□□□ 1.49
ShbQ6PD21 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ShbQ6PD21 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ShbQ6PD21 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
ShbQ6PD21 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ShbQ6PD21 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ShbQ6PD21 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
ShbQ6PD21 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms