Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
RoraP51448 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RoraP51448 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.72■□□□□ 0.91
RoraP51448 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
RoraP51448 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RoraP51448 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RoraP51448 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
RoraP51448 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.71■□□□□ 0.91
RoraP51448 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RoraP51448 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RoraP51448 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RoraP51448 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RoraP51448 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.7■□□□□ 0.9
RoraP51448 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RoraP51448 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RoraP51448 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RoraP51448 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RoraP51448 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RoraP51448 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RoraP51448 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RoraP51448 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.68■□□□□ 0.9
RoraP51448 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RoraP51448 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RoraP51448 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RoraP51448 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RoraP51448 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RoraP51448 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RoraP51448 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RoraP51448 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RoraP51448 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RoraP51448 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RoraP51448 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RoraP51448 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RoraP51448 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RoraP51448 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RoraP51448 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RoraP51448 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RoraP51448 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RoraP51448 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RoraP51448 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.65■□□□□ 0.9
RoraP51448 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.65■□□□□ 0.9
RoraP51448 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RoraP51448 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RoraP51448 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RoraP51448 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.64■□□□□ 0.9
RoraP51448 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RoraP51448 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RoraP51448 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RoraP51448 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.63■□□□□ 0.89
RoraP51448 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.63■□□□□ 0.89
RoraP51448 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.63■□□□□ 0.89
RoraP51448 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RoraP51448 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RoraP51448 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RoraP51448 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RoraP51448 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RoraP51448 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RoraP51448 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RoraP51448 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RoraP51448 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RoraP51448 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.61■□□□□ 0.89
RoraP51448 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.61■□□□□ 0.89
RoraP51448 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RoraP51448 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.6■□□□□ 0.89
RoraP51448 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RoraP51448 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.6■□□□□ 0.89
RoraP51448 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RoraP51448 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.59■□□□□ 0.89
RoraP51448 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RoraP51448 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RoraP51448 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RoraP51448 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RoraP51448 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
RoraP51448 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
RoraP51448 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RoraP51448 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RoraP51448 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RoraP51448 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RoraP51448 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RoraP51448 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RoraP51448 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RoraP51448 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RoraP51448 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RoraP51448 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RoraP51448 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RoraP51448 Gm15820-201ENSMUST00000201566 728 ntBASIC20.56■□□□□ 0.88
RoraP51448 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.56■□□□□ 0.88
RoraP51448 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RoraP51448 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RoraP51448 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RoraP51448 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
RoraP51448 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RoraP51448 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RoraP51448 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RoraP51448 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
RoraP51448 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RoraP51448 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RoraP51448 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.54■□□□□ 0.88
RoraP51448 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RoraP51448 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms