Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Efnb3O35393 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Efnb3O35393 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.25■□□□□ 0.35
Efnb3O35393 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Efnb3O35393 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.25■□□□□ 0.35
Efnb3O35393 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Efnb3O35393 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Efnb3O35393 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Efnb3O35393 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Efnb3O35393 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Efnb3O35393 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Efnb3O35393 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Efnb3O35393 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Efnb3O35393 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.23■□□□□ 0.35
Efnb3O35393 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Efnb3O35393 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.23■□□□□ 0.35
Efnb3O35393 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Efnb3O35393 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.23■□□□□ 0.35
Efnb3O35393 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Efnb3O35393 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Efnb3O35393 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Efnb3O35393 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Efnb3O35393 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Efnb3O35393 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.22■□□□□ 0.35
Efnb3O35393 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Efnb3O35393 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Efnb3O35393 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Efnb3O35393 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Efnb3O35393 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Efnb3O35393 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Efnb3O35393 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Efnb3O35393 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Efnb3O35393 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Efnb3O35393 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Efnb3O35393 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Efnb3O35393 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Efnb3O35393 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Efnb3O35393 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Efnb3O35393 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Efnb3O35393 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Efnb3O35393 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Efnb3O35393 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Efnb3O35393 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Efnb3O35393 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Efnb3O35393 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.2■□□□□ 0.34
Efnb3O35393 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Efnb3O35393 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Efnb3O35393 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Efnb3O35393 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Efnb3O35393 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Efnb3O35393 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Efnb3O35393 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Efnb3O35393 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Efnb3O35393 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.19■□□□□ 0.34
Efnb3O35393 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Efnb3O35393 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Efnb3O35393 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Efnb3O35393 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Efnb3O35393 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Efnb3O35393 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Efnb3O35393 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Efnb3O35393 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Efnb3O35393 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.19■□□□□ 0.34
Efnb3O35393 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.18■□□□□ 0.34
Efnb3O35393 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Efnb3O35393 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Efnb3O35393 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Efnb3O35393 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Efnb3O35393 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Efnb3O35393 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Efnb3O35393 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.16■□□□□ 0.34
Efnb3O35393 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Efnb3O35393 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Efnb3O35393 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Efnb3O35393 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Efnb3O35393 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Efnb3O35393 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Efnb3O35393 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Efnb3O35393 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Efnb3O35393 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Efnb3O35393 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Efnb3O35393 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Efnb3O35393 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Efnb3O35393 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Efnb3O35393 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Efnb3O35393 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Efnb3O35393 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Efnb3O35393 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Efnb3O35393 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Efnb3O35393 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Efnb3O35393 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Efnb3O35393 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Efnb3O35393 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Efnb3O35393 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Efnb3O35393 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Efnb3O35393 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Efnb3O35393 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Efnb3O35393 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Efnb3O35393 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Efnb3O35393 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms