Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-6A0A075B6B2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6n-6A0A075B6B2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6n-6A0A075B6B2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6n-6A0A075B6B2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6n-6A0A075B6B2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6n-6A0A075B6B2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6n-6A0A075B6B2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav6n-6A0A075B6B2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6n-6A0A075B6B2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6n-6A0A075B6B2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6n-6A0A075B6B2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav6n-6A0A075B6B2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6n-6A0A075B6B2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6n-6A0A075B6B2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6n-6A0A075B6B2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6n-6A0A075B6B2 Gm11599-201ENSMUST00000118720 878 ntBASIC16.23■□□□□ 0.19
Trav6n-6A0A075B6B2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6n-6A0A075B6B2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6n-6A0A075B6B2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6n-6A0A075B6B2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6n-6A0A075B6B2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Trav6n-6A0A075B6B2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6n-6A0A075B6B2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6n-6A0A075B6B2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6n-6A0A075B6B2 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.21■□□□□ 0.19
Trav6n-6A0A075B6B2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6n-6A0A075B6B2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav6n-6A0A075B6B2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6n-6A0A075B6B2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6n-6A0A075B6B2 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.21■□□□□ 0.18
Trav6n-6A0A075B6B2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-6A0A075B6B2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-6A0A075B6B2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trav6n-6A0A075B6B2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav6n-6A0A075B6B2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-6A0A075B6B2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-6A0A075B6B2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-6A0A075B6B2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-6A0A075B6B2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav6n-6A0A075B6B2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-6A0A075B6B2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-6A0A075B6B2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-6A0A075B6B2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-6A0A075B6B2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-6A0A075B6B2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-6A0A075B6B2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-6A0A075B6B2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-6A0A075B6B2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-6A0A075B6B2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-6A0A075B6B2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-6A0A075B6B2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Trav6n-6A0A075B6B2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-6A0A075B6B2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-6A0A075B6B2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav6n-6A0A075B6B2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-6A0A075B6B2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-6A0A075B6B2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-6A0A075B6B2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-6A0A075B6B2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-6A0A075B6B2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-6A0A075B6B2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-6A0A075B6B2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-6A0A075B6B2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
Trav6n-6A0A075B6B2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-6A0A075B6B2 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.15■□□□□ 0.18
Trav6n-6A0A075B6B2 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.15■□□□□ 0.18
Trav6n-6A0A075B6B2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-6A0A075B6B2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-6A0A075B6B2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-6A0A075B6B2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-6A0A075B6B2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-6A0A075B6B2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav6n-6A0A075B6B2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-6A0A075B6B2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.13■□□□□ 0.17
Trav6n-6A0A075B6B2 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.13■□□□□ 0.17
Trav6n-6A0A075B6B2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-6A0A075B6B2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-6A0A075B6B2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav6n-6A0A075B6B2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-6A0A075B6B2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-6A0A075B6B2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav6n-6A0A075B6B2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-6A0A075B6B2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-6A0A075B6B2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-6A0A075B6B2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-6A0A075B6B2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav6n-6A0A075B6B2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.12■□□□□ 0.17
Trav6n-6A0A075B6B2 Gm37136-201ENSMUST00000194368 194 ntBASIC16.12■□□□□ 0.17
Trav6n-6A0A075B6B2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-6A0A075B6B2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-6A0A075B6B2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav6n-6A0A075B6B2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-6A0A075B6B2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-6A0A075B6B2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav6n-6A0A075B6B2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav6n-6A0A075B6B2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav6n-6A0A075B6B2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-6A0A075B6B2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.1■□□□□ 0.17
Trav6n-6A0A075B6B2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms