Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 GPR89P-201ENST00000407924 1495 ntBASIC19.67■□□□□ 0.74
CLIC4Q9Y696 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 SPDYE21P-201ENST00000413323 827 ntBASIC19.67■□□□□ 0.74
CLIC4Q9Y696 NUS1P2-201ENST00000417358 873 ntBASIC19.67■□□□□ 0.74
CLIC4Q9Y696 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 PCDHB19P-201ENST00000570871 2371 ntBASIC19.67■□□□□ 0.74
CLIC4Q9Y696 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 AC091076.1-201ENST00000610741 619 ntBASIC19.66■□□□□ 0.74
CLIC4Q9Y696 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC4Q9Y696 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 AL020989.1-201ENST00000422979 469 ntBASIC19.65■□□□□ 0.74
CLIC4Q9Y696 ABCD1P5-201ENST00000445663 754 ntBASIC19.65■□□□□ 0.74
CLIC4Q9Y696 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 AC093458.2-201ENST00000623150 629 ntBASIC19.65■□□□□ 0.74
CLIC4Q9Y696 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 PCDHB17P-201ENST00000539533 2393 ntBASIC19.65■□□□□ 0.74
CLIC4Q9Y696 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC4Q9Y696 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms