Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF6Q9Y252 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF6Q9Y252 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF6Q9Y252 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF6Q9Y252 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 AL022342.1-201ENST00000400363 863 ntBASIC16.29■□□□□ 0.2
RNF6Q9Y252 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 KRT16P4-201ENST00000453883 522 ntBASIC16.29■□□□□ 0.2
RNF6Q9Y252 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 RN7SL606P-201ENST00000472779 293 ntBASIC16.29■□□□□ 0.2
RNF6Q9Y252 VENTXP7-201ENST00000475503 772 ntBASIC16.29■□□□□ 0.2
RNF6Q9Y252 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF6Q9Y252 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF6Q9Y252 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 AL121912.1-201ENST00000603683 238 ntBASIC16.29■□□□□ 0.2
RNF6Q9Y252 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF6Q9Y252 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF6Q9Y252 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF6Q9Y252 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF6Q9Y252 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF6Q9Y252 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF6Q9Y252 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF6Q9Y252 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 AL353692.3-201ENST00000407031 1396 ntBASIC16.28■□□□□ 0.2
RNF6Q9Y252 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 AC079776.4-201ENST00000511039 504 ntBASIC16.28■□□□□ 0.2
RNF6Q9Y252 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 SLC25A6P4-201ENST00000586535 553 ntBASIC16.28■□□□□ 0.2
RNF6Q9Y252 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF6Q9Y252 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF6Q9Y252 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF6Q9Y252 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF6Q9Y252 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RNF6Q9Y252 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF6Q9Y252 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF6Q9Y252 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF6Q9Y252 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF6Q9Y252 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RNF6Q9Y252 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF6Q9Y252 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF6Q9Y252 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF6Q9Y252 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF6Q9Y252 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF6Q9Y252 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF6Q9Y252 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RNF6Q9Y252 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RNF6Q9Y252 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF6Q9Y252 AC106795.1-205ENST00000512851 1056 ntBASIC16.27■□□□□ 0.2
RNF6Q9Y252 AL662844.1-201ENST00000546340 181 ntBASIC16.27■□□□□ 0.2
RNF6Q9Y252 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF6Q9Y252 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RNF6Q9Y252 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF6Q9Y252 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF6Q9Y252 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF6Q9Y252 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF6Q9Y252 NSUN5P1-202ENST00000421140 1535 ntBASIC16.27■□□□□ 0.2
RNF6Q9Y252 NSUN5P2-203ENST00000457352 1529 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms