Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KCNA3P22001 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNA3P22001 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.9■□□□□ 0.94
KCNA3P22001 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNA3P22001 SLC22A20-204ENST00000530038 1673 ntBASIC20.89■□□□□ 0.94
KCNA3P22001 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.89■□□□□ 0.94
KCNA3P22001 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.89■□□□□ 0.94
KCNA3P22001 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.89■□□□□ 0.94
KCNA3P22001 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KCNA3P22001 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KCNA3P22001 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA3P22001 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
KCNA3P22001 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA3P22001 AC087499.5-201ENST00000452760 1342 ntBASIC20.89■□□□□ 0.93
KCNA3P22001 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.89■□□□□ 0.93
KCNA3P22001 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA3P22001 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA3P22001 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA3P22001 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA3P22001 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
KCNA3P22001 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA3P22001 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.89■□□□□ 0.93
KCNA3P22001 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.89■□□□□ 0.93
KCNA3P22001 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.89■□□□□ 0.93
KCNA3P22001 MIR3909-201ENST00000579518 119 ntBASIC20.89■□□□□ 0.93
KCNA3P22001 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.89■□□□□ 0.93
KCNA3P22001 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA3P22001 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
KCNA3P22001 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA3P22001 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.89■□□□□ 0.93
KCNA3P22001 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA3P22001 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA3P22001 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA3P22001 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA3P22001 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.88■□□□□ 0.93
KCNA3P22001 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
KCNA3P22001 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA3P22001 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA3P22001 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.88■□□□□ 0.93
KCNA3P22001 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
KCNA3P22001 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA3P22001 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.88■□□□□ 0.93
KCNA3P22001 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA3P22001 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA3P22001 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA3P22001 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA3P22001 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA3P22001 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.88■□□□□ 0.93
KCNA3P22001 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNA3P22001 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.88■□□□□ 0.93
KCNA3P22001 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA3P22001 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNA3P22001 TEX28P1-201ENST00000613479 1221 ntBASIC20.88■□□□□ 0.93
KCNA3P22001 TEX28P2-201ENST00000617764 1221 ntBASIC20.88■□□□□ 0.93
KCNA3P22001 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.88■□□□□ 0.93
KCNA3P22001 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA3P22001 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNA3P22001 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
KCNA3P22001 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
KCNA3P22001 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.88■□□□□ 0.93
KCNA3P22001 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
KCNA3P22001 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNA3P22001 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.87■□□□□ 0.93
KCNA3P22001 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.87■□□□□ 0.93
KCNA3P22001 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.87■□□□□ 0.93
KCNA3P22001 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.87■□□□□ 0.93
KCNA3P22001 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.87■□□□□ 0.93
KCNA3P22001 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNA3P22001 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNA3P22001 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.87■□□□□ 0.93
KCNA3P22001 AC084346.2-201ENST00000607097 949 ntBASIC20.87■□□□□ 0.93
KCNA3P22001 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNA3P22001 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA3P22001 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
KCNA3P22001 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA3P22001 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA3P22001 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA3P22001 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNA3P22001 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA3P22001 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA3P22001 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms