Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ApoeP08226 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
ApoeP08226 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ApoeP08226 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.51□□□□□ -0.25
ApoeP08226 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
ApoeP08226 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.51□□□□□ -0.25
ApoeP08226 Gm4899-201ENSMUST00000178708 719 ntBASIC13.51□□□□□ -0.25
ApoeP08226 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ApoeP08226 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ApoeP08226 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
ApoeP08226 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.5□□□□□ -0.25
ApoeP08226 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.5□□□□□ -0.25
ApoeP08226 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
ApoeP08226 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.5□□□□□ -0.25
ApoeP08226 Gm14859-201ENSMUST00000117752 357 ntBASIC13.5□□□□□ -0.25
ApoeP08226 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.5□□□□□ -0.25
ApoeP08226 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ApoeP08226 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.5□□□□□ -0.25
ApoeP08226 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.5□□□□□ -0.25
ApoeP08226 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.5□□□□□ -0.25
ApoeP08226 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.5□□□□□ -0.25
ApoeP08226 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.5□□□□□ -0.25
ApoeP08226 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ApoeP08226 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
ApoeP08226 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ApoeP08226 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms