Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC23.72■■□□□ 1.39
MSH5O43196 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC23.72■■□□□ 1.39
MSH5O43196 TDGF1-205ENST00000542931 1192 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
MSH5O43196 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC23.72■■□□□ 1.39
MSH5O43196 AC104390.1-201ENST00000555663 520 ntBASIC23.72■■□□□ 1.39
MSH5O43196 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC23.72■■□□□ 1.39
MSH5O43196 AC064872.1-201ENST00000604823 1072 ntBASIC23.72■■□□□ 1.39
MSH5O43196 AL591684.3-201ENST00000605187 298 ntBASIC23.72■■□□□ 1.39
MSH5O43196 HOTTIP_1.1-201ENST00000620415 57 ntBASIC23.72■■□□□ 1.39
MSH5O43196 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC23.72■■□□□ 1.39
MSH5O43196 AC141586.3-201ENST00000562166 1838 ntBASIC23.72■■□□□ 1.39
MSH5O43196 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
MSH5O43196 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
MSH5O43196 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23.72■■□□□ 1.39
MSH5O43196 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MSH5O43196 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
MSH5O43196 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MSH5O43196 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MSH5O43196 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
MSH5O43196 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
MSH5O43196 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.71■■□□□ 1.39
MSH5O43196 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.71■■□□□ 1.39
MSH5O43196 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.71■■□□□ 1.39
MSH5O43196 WFDC13-201ENST00000305479 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MSH5O43196 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MSH5O43196 OR52B5P-203ENST00000641694 1313 ntBASIC23.71■■□□□ 1.39
MSH5O43196 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MSH5O43196 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC23.71■■□□□ 1.39
MSH5O43196 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC23.71■■□□□ 1.39
MSH5O43196 AC115285.1-201ENST00000424879 736 ntBASIC23.71■■□□□ 1.39
MSH5O43196 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC23.71■■□□□ 1.39
MSH5O43196 AP003033.1-201ENST00000527244 415 ntBASIC23.71■■□□□ 1.39
MSH5O43196 IRF8-202ENST00000562492 946 ntTSL 3 BASIC23.71■■□□□ 1.39
MSH5O43196 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.71■■□□□ 1.39
MSH5O43196 AP003399.1-201ENST00000637534 361 ntBASIC23.71■■□□□ 1.39
MSH5O43196 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC23.71■■□□□ 1.39
MSH5O43196 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MSH5O43196 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC23.71■■□□□ 1.39
MSH5O43196 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
MSH5O43196 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MSH5O43196 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MSH5O43196 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
MSH5O43196 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
MSH5O43196 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
MSH5O43196 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.39
MSH5O43196 CBR3-AS1-204ENST00000453159 1499 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
MSH5O43196 KRT8P3-201ENST00000519669 1449 ntBASIC23.7■■□□□ 1.38
MSH5O43196 ZNF259P1-201ENST00000407656 1365 ntBASIC23.7■■□□□ 1.38
MSH5O43196 IL36G-201ENST00000259205 1195 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MSH5O43196 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MSH5O43196 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MSH5O43196 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
MSH5O43196 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
MSH5O43196 AC234781.2-201ENST00000426370 994 ntBASIC23.7■■□□□ 1.38
MSH5O43196 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC23.7■■□□□ 1.38
MSH5O43196 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC23.7■■□□□ 1.38
MSH5O43196 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
MSH5O43196 AC011352.1-201ENST00000512300 793 ntBASIC23.7■■□□□ 1.38
MSH5O43196 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
MSH5O43196 LINC02084-201ENST00000606069 1096 ntBASIC23.7■■□□□ 1.38
MSH5O43196 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MSH5O43196 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MSH5O43196 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC23.7■■□□□ 1.38
MSH5O43196 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
MSH5O43196 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.7■■□□□ 1.38
MSH5O43196 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
MSH5O43196 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC23.69■■□□□ 1.38
MSH5O43196 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
MSH5O43196 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
MSH5O43196 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.69■■□□□ 1.38
MSH5O43196 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
MSH5O43196 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC23.69■■□□□ 1.38
MSH5O43196 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MSH5O43196 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
MSH5O43196 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC23.69■■□□□ 1.38
MSH5O43196 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC23.69■■□□□ 1.38
MSH5O43196 AC087235.1-201ENST00000538297 1329 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
MSH5O43196 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
MSH5O43196 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
MSH5O43196 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MSH5O43196 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
MSH5O43196 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MSH5O43196 IGHGP-201ENST00000390555 1178 ntBASIC23.69■■□□□ 1.38
MSH5O43196 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
MSH5O43196 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC23.69■■□□□ 1.38
MSH5O43196 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC23.69■■□□□ 1.38
MSH5O43196 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MSH5O43196 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
MSH5O43196 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC23.69■■□□□ 1.38
MSH5O43196 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC23.69■■□□□ 1.38
MSH5O43196 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
MSH5O43196 AC011840.4-201ENST00000578471 627 ntBASIC23.69■■□□□ 1.38
MSH5O43196 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC23.69■■□□□ 1.38
MSH5O43196 PIN1-206ENST00000587625 878 ntTSL 2 BASIC23.69■■□□□ 1.38
MSH5O43196 AL049840.3-201ENST00000602669 611 ntBASIC23.69■■□□□ 1.38
MSH5O43196 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC23.69■■□□□ 1.38
MSH5O43196 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MSH5O43196 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MSH5O43196 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
MSH5O43196 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms