Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx2P48379 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx2P48379 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx2P48379 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx2P48379 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx2P48379 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx2P48379 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Rfx2P48379 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx2P48379 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx2P48379 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx2P48379 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx2P48379 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Rfx2P48379 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rfx2P48379 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rfx2P48379 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Gm13464-201ENSMUST00000119418 935 ntBASIC15.01□□□□□ -0.01
Rfx2P48379 Gm12151-201ENSMUST00000121374 290 ntBASIC15.01□□□□□ -0.01
Rfx2P48379 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.01□□□□□ -0.01
Rfx2P48379 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.01□□□□□ -0.01
Rfx2P48379 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.01□□□□□ -0.01
Rfx2P48379 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.01□□□□□ -0.01
Rfx2P48379 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Rfx2P48379 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx2P48379 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx2P48379 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfx2P48379 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15□□□□□ -0.01
Rfx2P48379 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx2P48379 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15□□□□□ -0.01
Rfx2P48379 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx2P48379 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rfx2P48379 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Rfx2P48379 Gm13823-201ENSMUST00000119930 345 ntBASIC15□□□□□ -0.01
Rfx2P48379 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15□□□□□ -0.01
Rfx2P48379 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15□□□□□ -0.01
Rfx2P48379 Gm38294-201ENSMUST00000192831 381 ntBASIC15□□□□□ -0.01
Rfx2P48379 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15□□□□□ -0.01
Rfx2P48379 AC125206.2-201ENSMUST00000217454 574 ntBASIC15□□□□□ -0.01
Rfx2P48379 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx2P48379 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx2P48379 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfx2P48379 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx2P48379 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15□□□□□ -0.01
Rfx2P48379 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15□□□□□ -0.01
Rfx2P48379 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx2P48379 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rfx2P48379 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfx2P48379 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx2P48379 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx2P48379 Gm44645-201ENSMUST00000205492 1653 ntBASIC15□□□□□ -0.01
Rfx2P48379 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx2P48379 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15□□□□□ -0.01
Rfx2P48379 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Gm5566-201ENSMUST00000116118 459 ntBASIC14.99□□□□□ -0.01
Rfx2P48379 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.99□□□□□ -0.01
Rfx2P48379 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rfx2P48379 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.99□□□□□ -0.01
Rfx2P48379 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Gm9719-201ENSMUST00000162765 543 ntBASIC14.99□□□□□ -0.01
Rfx2P48379 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.99□□□□□ -0.01
Rfx2P48379 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.99□□□□□ -0.01
Rfx2P48379 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.99□□□□□ -0.01
Rfx2P48379 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.99□□□□□ -0.01
Rfx2P48379 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx2P48379 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms