Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 AC112698.1-201ENST00000510299 916 ntBASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 AL390719.2-201ENST00000606993 987 ntBASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 AC106886.4-201ENST00000623557 2502 ntBASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 AC060834.1-201ENST00000443027 2032 ntBASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 AL353692.3-201ENST00000407031 1396 ntBASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 TSPY22P-201ENST00000427496 604 ntBASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 BX276092.5-203ENST00000456199 560 ntBASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 KRT8P26-201ENST00000534154 1276 ntBASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 RNF126P1-202ENST00000569893 925 ntBASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 AL121672.3-201ENST00000608644 468 ntBASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 AL139327.4-201ENST00000612362 153 ntBASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 AC004263.2-201ENST00000617183 678 ntBASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.4□□□□□ -0.1
LIN7CQ9NUP9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
LIN7CQ9NUP9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.11
LIN7CQ9NUP9 TNRC18P3-201ENST00000441896 2691 ntBASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.39□□□□□ -0.11
LIN7CQ9NUP9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms