Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 RFPL4AP1-201ENST00000530883 850 ntBASIC16.83■□□□□ 0.28
THSD1Q9NS62 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 MIR4469-201ENST00000583919 79 ntBASIC16.83■□□□□ 0.28
THSD1Q9NS62 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
THSD1Q9NS62 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THSD1Q9NS62 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THSD1Q9NS62 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
THSD1Q9NS62 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
THSD1Q9NS62 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
THSD1Q9NS62 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
THSD1Q9NS62 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THSD1Q9NS62 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.82■□□□□ 0.28
THSD1Q9NS62 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THSD1Q9NS62 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
THSD1Q9NS62 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THSD1Q9NS62 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THSD1Q9NS62 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THSD1Q9NS62 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THSD1Q9NS62 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.82■□□□□ 0.28
THSD1Q9NS62 AC073621.1-201ENST00000392730 636 ntBASIC16.82■□□□□ 0.28
THSD1Q9NS62 CRYGEP-201ENST00000412192 528 ntBASIC16.82■□□□□ 0.28
THSD1Q9NS62 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.82■□□□□ 0.28
THSD1Q9NS62 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.82■□□□□ 0.28
THSD1Q9NS62 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.82■□□□□ 0.28
THSD1Q9NS62 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.82■□□□□ 0.28
THSD1Q9NS62 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THSD1Q9NS62 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THSD1Q9NS62 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
THSD1Q9NS62 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THSD1Q9NS62 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THSD1Q9NS62 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
THSD1Q9NS62 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 SIGLEC16-201ENST00000599858 1437 ntBASIC16.81■□□□□ 0.28
THSD1Q9NS62 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 AC122714.2-201ENST00000502787 707 ntBASIC16.81■□□□□ 0.28
THSD1Q9NS62 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 AL589182.2-201ENST00000619332 1049 ntBASIC16.81■□□□□ 0.28
THSD1Q9NS62 C20orf181-201ENST00000623918 480 ntBASIC16.81■□□□□ 0.28
THSD1Q9NS62 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.81■□□□□ 0.28
THSD1Q9NS62 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THSD1Q9NS62 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
THSD1Q9NS62 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.8■□□□□ 0.28
THSD1Q9NS62 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.8■□□□□ 0.28
THSD1Q9NS62 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.8■□□□□ 0.28
THSD1Q9NS62 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THSD1Q9NS62 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
THSD1Q9NS62 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.8■□□□□ 0.28
THSD1Q9NS62 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.8■□□□□ 0.28
THSD1Q9NS62 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
THSD1Q9NS62 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
THSD1Q9NS62 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
THSD1Q9NS62 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THSD1Q9NS62 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
THSD1Q9NS62 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THSD1Q9NS62 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
THSD1Q9NS62 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms