Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 BX276092.5-203ENST00000456199 560 ntBASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 AL445228.2-201ENST00000605589 952 ntBASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 AL121956.5-201ENST00000625261 221 ntBASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 AL353593.2-201ENST00000602529 1483 ntBASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
LRTM1Q9HBL6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.64■□□□□ 0.26
LRTM1Q9HBL6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
LRTM1Q9HBL6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
LRTM1Q9HBL6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 AL031133.1-201ENST00000406807 723 ntBASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 CHCHD2P8-201ENST00000429873 447 ntBASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 AC091607.1-201ENST00000490318 1060 ntBASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 AL121672.3-201ENST00000608644 468 ntBASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 EGFEM1P-202ENST00000431685 1563 ntBASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRTM1Q9HBL6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 KRT18P35-201ENST00000510488 1269 ntBASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 STK19B-204ENST00000512515 211 ntBASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 AC124947.2-201ENST00000547118 1133 ntBASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 NTF6B-201ENST00000591913 560 ntBASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms