Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF1Q9BSM1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCGF1Q9BSM1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.58□□□□□ -0.07
PCGF1Q9BSM1 INTS4P1-201ENST00000438455 1935 ntBASIC14.58□□□□□ -0.07
PCGF1Q9BSM1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
PCGF1Q9BSM1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCGF1Q9BSM1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PCGF1Q9BSM1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PCGF1Q9BSM1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCGF1Q9BSM1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCGF1Q9BSM1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 FAM220CP-201ENST00000395253 831 ntBASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 AC079776.4-201ENST00000511039 504 ntBASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 KRT8P47-201ENST00000604727 1398 ntBASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.58□□□□□ -0.08
PCGF1Q9BSM1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 AC007967.3-201ENST00000434308 558 ntBASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 FDX1P1-201ENST00000449115 551 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms