Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL13Q99616 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CCL13Q99616 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL13Q99616 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL13Q99616 SIGLEC16-201ENST00000599858 1437 ntBASIC14.53□□□□□ -0.08
CCL13Q99616 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL13Q99616 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL13Q99616 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL13Q99616 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCL13Q99616 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL13Q99616 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.53□□□□□ -0.08
CCL13Q99616 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL13Q99616 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL13Q99616 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CCL13Q99616 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL13Q99616 FAAHP1-202ENST00000446499 1238 ntBASIC14.53□□□□□ -0.08
CCL13Q99616 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL13Q99616 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL13Q99616 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL13Q99616 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL13Q99616 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.53□□□□□ -0.08
CCL13Q99616 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL13Q99616 AL031008.1-201ENST00000619963 541 ntBASIC14.53□□□□□ -0.08
CCL13Q99616 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCL13Q99616 AC073592.4-201ENST00000623827 446 ntBASIC14.53□□□□□ -0.08
CCL13Q99616 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCL13Q99616 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL13Q99616 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL13Q99616 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL13Q99616 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL13Q99616 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CCL13Q99616 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL13Q99616 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.52□□□□□ -0.08
CCL13Q99616 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL13Q99616 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL13Q99616 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL13Q99616 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.52□□□□□ -0.08
CCL13Q99616 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL13Q99616 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CCL13Q99616 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.52□□□□□ -0.08
CCL13Q99616 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.52□□□□□ -0.08
CCL13Q99616 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL13Q99616 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL13Q99616 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL13Q99616 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL13Q99616 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CCL13Q99616 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CCL13Q99616 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.52□□□□□ -0.09
CCL13Q99616 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL13Q99616 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL13Q99616 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL13Q99616 AL022326.1-202ENST00000641533 845 ntBASIC14.52□□□□□ -0.09
CCL13Q99616 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL13Q99616 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CCL13Q99616 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CCL13Q99616 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL13Q99616 AL135999.2-201ENST00000622438 1686 ntBASIC14.52□□□□□ -0.09
CCL13Q99616 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL13Q99616 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.52□□□□□ -0.09
CCL13Q99616 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL13Q99616 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL13Q99616 AC139713.2-201ENST00000641328 2723 ntBASIC14.51□□□□□ -0.09
CCL13Q99616 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL13Q99616 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL13Q99616 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL13Q99616 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL13Q99616 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL13Q99616 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL13Q99616 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL13Q99616 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL13Q99616 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CCL13Q99616 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL13Q99616 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.51□□□□□ -0.09
CCL13Q99616 FAM197Y8-203ENST00000450145 560 ntBASIC14.51□□□□□ -0.09
CCL13Q99616 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CCL13Q99616 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL13Q99616 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL13Q99616 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.51□□□□□ -0.09
CCL13Q99616 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL13Q99616 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.51□□□□□ -0.09
CCL13Q99616 MTDHP4-201ENST00000600287 670 ntBASIC14.51□□□□□ -0.09
CCL13Q99616 TP73-AS1-207ENST00000624167 988 ntBASIC14.51□□□□□ -0.09
CCL13Q99616 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL13Q99616 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
CCL13Q99616 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL13Q99616 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL13Q99616 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.51□□□□□ -0.09
CCL13Q99616 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL13Q99616 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL13Q99616 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.51□□□□□ -0.09
CCL13Q99616 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
CCL13Q99616 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL13Q99616 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL13Q99616 AC097637.2-201ENST00000624096 1997 ntBASIC14.51□□□□□ -0.09
CCL13Q99616 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL13Q99616 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.5□□□□□ -0.09
CCL13Q99616 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CCL13Q99616 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CCL13Q99616 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL13Q99616 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms