Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 MYCLP1-201ENST00000372451 1075 ntBASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 AC074386.1-202ENST00000463561 864 ntBASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 FLJ13224-201ENST00000313737 1514 ntBASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 AC007064.4-201ENST00000637740 555 ntBASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
COLGALT1Q8NBJ5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 AC023141.13-201ENST00000604991 943 ntBASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 PI4KAP1-204ENST00000612579 1703 ntBASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 PCDHB18P-201ENST00000524813 2368 ntBASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COLGALT1Q8NBJ5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COLGALT1Q8NBJ5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COLGALT1Q8NBJ5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COLGALT1Q8NBJ5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COLGALT1Q8NBJ5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COLGALT1Q8NBJ5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COLGALT1Q8NBJ5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.61■□□□□ 0.57
COLGALT1Q8NBJ5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.61■□□□□ 0.57
COLGALT1Q8NBJ5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms