Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP1S1P61966 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP1S1P61966 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.43■□□□□ 0.38
AP1S1P61966 AL023806.1-201ENST00000603994 1649 ntBASIC17.43■□□□□ 0.38
AP1S1P61966 PP12613-201ENST00000424958 2230 ntBASIC17.43■□□□□ 0.38
AP1S1P61966 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S1P61966 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S1P61966 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S1P61966 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S1P61966 EGFEM1P-202ENST00000431685 1563 ntBASIC17.42■□□□□ 0.38
AP1S1P61966 AC006504.4-201ENST00000592118 1568 ntBASIC17.42■□□□□ 0.38
AP1S1P61966 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S1P61966 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.42■□□□□ 0.38
AP1S1P61966 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
AP1S1P61966 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S1P61966 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S1P61966 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S1P61966 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.42■□□□□ 0.38
AP1S1P61966 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.42■□□□□ 0.38
AP1S1P61966 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.42■□□□□ 0.38
AP1S1P61966 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.42■□□□□ 0.38
AP1S1P61966 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S1P61966 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S1P61966 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.42■□□□□ 0.38
AP1S1P61966 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S1P61966 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S1P61966 AP002414.3-201ENST00000589352 1468 ntBASIC17.42■□□□□ 0.38
AP1S1P61966 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.42■□□□□ 0.38
AP1S1P61966 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.42■□□□□ 0.38
AP1S1P61966 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S1P61966 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S1P61966 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
AP1S1P61966 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S1P61966 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
AP1S1P61966 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
AP1S1P61966 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S1P61966 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S1P61966 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S1P61966 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
AP1S1P61966 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S1P61966 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S1P61966 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
AP1S1P61966 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.41■□□□□ 0.38
AP1S1P61966 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S1P61966 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S1P61966 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.41■□□□□ 0.38
AP1S1P61966 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S1P61966 AC092910.1-201ENST00000482027 1129 ntBASIC17.41■□□□□ 0.38
AP1S1P61966 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.41■□□□□ 0.38
AP1S1P61966 AC079776.4-201ENST00000511039 504 ntBASIC17.41■□□□□ 0.38
AP1S1P61966 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.41■□□□□ 0.38
AP1S1P61966 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S1P61966 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.41■□□□□ 0.38
AP1S1P61966 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.41■□□□□ 0.38
AP1S1P61966 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.41■□□□□ 0.38
AP1S1P61966 AC116407.3-201ENST00000623905 1129 ntBASIC17.41■□□□□ 0.38
AP1S1P61966 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.41■□□□□ 0.38
AP1S1P61966 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.41■□□□□ 0.38
AP1S1P61966 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S1P61966 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
AP1S1P61966 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
AP1S1P61966 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
AP1S1P61966 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S1P61966 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
AP1S1P61966 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S1P61966 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
AP1S1P61966 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S1P61966 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S1P61966 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
AP1S1P61966 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.41■□□□□ 0.38
AP1S1P61966 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
AP1S1P61966 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 AC243591.1-201ENST00000452967 1364 ntBASIC17.4■□□□□ 0.38
AP1S1P61966 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.4■□□□□ 0.38
AP1S1P61966 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.4■□□□□ 0.38
AP1S1P61966 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.4■□□□□ 0.38
AP1S1P61966 AP002414.1-201ENST00000391405 1147 ntBASIC17.4■□□□□ 0.38
AP1S1P61966 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.4■□□□□ 0.38
AP1S1P61966 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
AP1S1P61966 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.4■□□□□ 0.38
AP1S1P61966 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.4■□□□□ 0.38
AP1S1P61966 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.4■□□□□ 0.38
AP1S1P61966 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
AP1S1P61966 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.4■□□□□ 0.38
AP1S1P61966 AC005593.1-201ENST00000624894 515 ntBASIC17.4■□□□□ 0.38
AP1S1P61966 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.4■□□□□ 0.38
AP1S1P61966 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
AP1S1P61966 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms