Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.03■□□□□ -0
HCFC1P51610 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.03■□□□□ -0
HCFC1P51610 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
HCFC1P51610 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
HCFC1P51610 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HCFC1P51610 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.03■□□□□ -0
HCFC1P51610 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCFC1P51610 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCFC1P51610 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.03■□□□□ -0
HCFC1P51610 AC067852.2-201ENST00000590513 2313 ntBASIC15.03■□□□□ -0
HCFC1P51610 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
HCFC1P51610 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCFC1P51610 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.03■□□□□ -0
HCFC1P51610 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCFC1P51610 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
HCFC1P51610 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.03■□□□□ -0
HCFC1P51610 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.03■□□□□ -0
HCFC1P51610 AC069262.1-201ENST00000539058 672 ntBASIC15.03■□□□□ -0
HCFC1P51610 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HCFC1P51610 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.03■□□□□ -0
HCFC1P51610 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCFC1P51610 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HCFC1P51610 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.03■□□□□ -0
HCFC1P51610 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.03■□□□□ -0
HCFC1P51610 AP000997.3-201ENST00000623333 2250 ntBASIC15.03■□□□□ -0
HCFC1P51610 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
HCFC1P51610 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HCFC1P51610 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.02■□□□□ -0
HCFC1P51610 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HCFC1P51610 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.02■□□□□ -0
HCFC1P51610 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.02■□□□□ -0
HCFC1P51610 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.02■□□□□ -0
HCFC1P51610 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HCFC1P51610 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HCFC1P51610 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.02■□□□□ -0
HCFC1P51610 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
HCFC1P51610 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.02■□□□□ -0
HCFC1P51610 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.02■□□□□ -0
HCFC1P51610 AC239800.4-201ENST00000603712 296 ntBASIC15.02■□□□□ -0
HCFC1P51610 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
HCFC1P51610 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.02■□□□□ -0
HCFC1P51610 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HCFC1P51610 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HCFC1P51610 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HCFC1P51610 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HCFC1P51610 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.02□□□□□ -0.01
HCFC1P51610 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HCFC1P51610 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HCFC1P51610 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.02□□□□□ -0.01
HCFC1P51610 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HCFC1P51610 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HCFC1P51610 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
HCFC1P51610 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.02□□□□□ -0.01
HCFC1P51610 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HCFC1P51610 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HCFC1P51610 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HCFC1P51610 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HCFC1P51610 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.02□□□□□ -0.01
HCFC1P51610 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.02□□□□□ -0.01
HCFC1P51610 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.02□□□□□ -0.01
HCFC1P51610 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.02□□□□□ -0.01
HCFC1P51610 AC004835.2-201ENST00000603762 682 ntBASIC15.02□□□□□ -0.01
HCFC1P51610 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
HCFC1P51610 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
HCFC1P51610 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.02□□□□□ -0.01
HCFC1P51610 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HCFC1P51610 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HCFC1P51610 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HCFC1P51610 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HCFC1P51610 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HCFC1P51610 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.01□□□□□ -0.01
HCFC1P51610 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
HCFC1P51610 AL121761.2-201ENST00000598007 1648 ntBASIC15.01□□□□□ -0.01
HCFC1P51610 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 PI4KAP1-204ENST00000612579 1703 ntBASIC15.01□□□□□ -0.01
HCFC1P51610 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
HCFC1P51610 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.01□□□□□ -0.01
HCFC1P51610 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.01□□□□□ -0.01
HCFC1P51610 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 PCDHB18P-201ENST00000524813 2368 ntBASIC15.01□□□□□ -0.01
HCFC1P51610 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HCFC1P51610 TFAMP1-201ENST00000412727 736 ntBASIC15.01□□□□□ -0.01
HCFC1P51610 FAM86GP-201ENST00000448322 971 ntBASIC15.01□□□□□ -0.01
HCFC1P51610 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 AC002558.1-201ENST00000488906 803 ntBASIC15.01□□□□□ -0.01
HCFC1P51610 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 ACTL9-202ENST00000612068 1252 ntBASIC15.01□□□□□ -0.01
HCFC1P51610 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HCFC1P51610 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HCFC1P51610 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms