Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.64■□□□□ 0.25
CCKBRP32239 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.64■□□□□ 0.25
CCKBRP32239 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CCKBRP32239 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCKBRP32239 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCKBRP32239 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CCKBRP32239 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.64■□□□□ 0.25
CCKBRP32239 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.64■□□□□ 0.25
CCKBRP32239 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.64■□□□□ 0.25
CCKBRP32239 AC004877.2-201ENST00000623941 599 ntBASIC16.64■□□□□ 0.25
CCKBRP32239 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.64■□□□□ 0.25
CCKBRP32239 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCKBRP32239 AC005332.8-201ENST00000622750 2735 ntBASIC16.64■□□□□ 0.25
CCKBRP32239 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.64■□□□□ 0.25
CCKBRP32239 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CCKBRP32239 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.64■□□□□ 0.25
CCKBRP32239 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCKBRP32239 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCKBRP32239 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCKBRP32239 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.63■□□□□ 0.25
CCKBRP32239 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCKBRP32239 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCKBRP32239 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.63■□□□□ 0.25
CCKBRP32239 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCKBRP32239 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.63■□□□□ 0.25
CCKBRP32239 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCKBRP32239 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.63■□□□□ 0.25
CCKBRP32239 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.63■□□□□ 0.25
CCKBRP32239 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCKBRP32239 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.63■□□□□ 0.25
CCKBRP32239 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.63■□□□□ 0.25
CCKBRP32239 OR7E47P-204ENST00000575924 449 ntBASIC16.63■□□□□ 0.25
CCKBRP32239 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.63■□□□□ 0.25
CCKBRP32239 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCKBRP32239 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCKBRP32239 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCKBRP32239 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCKBRP32239 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCKBRP32239 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCKBRP32239 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCKBRP32239 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCKBRP32239 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCKBRP32239 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
CCKBRP32239 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.63■□□□□ 0.25
CCKBRP32239 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCKBRP32239 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCKBRP32239 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCKBRP32239 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCKBRP32239 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCKBRP32239 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCKBRP32239 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.62■□□□□ 0.25
CCKBRP32239 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.62■□□□□ 0.25
CCKBRP32239 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CCKBRP32239 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.62■□□□□ 0.25
CCKBRP32239 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.62■□□□□ 0.25
CCKBRP32239 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCKBRP32239 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCKBRP32239 ACTG1P4-201ENST00000425123 1122 ntBASIC16.62■□□□□ 0.25
CCKBRP32239 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.62■□□□□ 0.25
CCKBRP32239 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.62■□□□□ 0.25
CCKBRP32239 ACTG1P14-201ENST00000446382 1122 ntBASIC16.62■□□□□ 0.25
CCKBRP32239 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.62■□□□□ 0.25
CCKBRP32239 CEND1P1-201ENST00000451006 455 ntBASIC16.62■□□□□ 0.25
CCKBRP32239 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCKBRP32239 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
CCKBRP32239 RFPL4AP1-201ENST00000530883 850 ntBASIC16.62■□□□□ 0.25
CCKBRP32239 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.62■□□□□ 0.25
CCKBRP32239 KRT19P2-202ENST00000557173 1012 ntBASIC16.62■□□□□ 0.25
CCKBRP32239 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.62■□□□□ 0.25
CCKBRP32239 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
CCKBRP32239 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.62■□□□□ 0.25
CCKBRP32239 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.62■□□□□ 0.25
CCKBRP32239 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CCKBRP32239 AC007064.4-201ENST00000637740 555 ntBASIC16.62■□□□□ 0.25
CCKBRP32239 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCKBRP32239 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.62■□□□□ 0.25
CCKBRP32239 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCKBRP32239 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCKBRP32239 BCAR1-209ENST00000546196 1340 ntBASIC16.62■□□□□ 0.25
CCKBRP32239 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CCKBRP32239 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCKBRP32239 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCKBRP32239 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCKBRP32239 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCKBRP32239 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCKBRP32239 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCKBRP32239 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCKBRP32239 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CCKBRP32239 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCKBRP32239 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCKBRP32239 BICD1-207ENST00000551848 1962 ntBASIC16.61■□□□□ 0.25
CCKBRP32239 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms