Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.94■□□□□ 0.46
HOXA9P31269 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HOXA9P31269 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.94■□□□□ 0.46
HOXA9P31269 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA9P31269 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA9P31269 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXA9P31269 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXA9P31269 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA9P31269 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA9P31269 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA9P31269 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.93■□□□□ 0.46
HOXA9P31269 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.93■□□□□ 0.46
HOXA9P31269 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA9P31269 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
HOXA9P31269 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXA9P31269 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA9P31269 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA9P31269 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXA9P31269 LINC00304-203ENST00000565008 1864 ntBASIC17.93■□□□□ 0.46
HOXA9P31269 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA9P31269 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXA9P31269 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA9P31269 AL627223.1-201ENST00000416693 442 ntBASIC17.93■□□□□ 0.46
HOXA9P31269 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.93■□□□□ 0.46
HOXA9P31269 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXA9P31269 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.93■□□□□ 0.46
HOXA9P31269 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.93■□□□□ 0.46
HOXA9P31269 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HOXA9P31269 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HOXA9P31269 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.93■□□□□ 0.46
HOXA9P31269 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA9P31269 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.93■□□□□ 0.46
HOXA9P31269 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HOXA9P31269 LINC00628-201ENST00000628516 1289 ntBASIC17.93■□□□□ 0.46
HOXA9P31269 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HOXA9P31269 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXA9P31269 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA9P31269 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA9P31269 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HOXA9P31269 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA9P31269 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA9P31269 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA9P31269 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA9P31269 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HOXA9P31269 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA9P31269 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA9P31269 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA9P31269 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA9P31269 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.92■□□□□ 0.46
HOXA9P31269 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXA9P31269 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA9P31269 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA9P31269 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HOXA9P31269 AL671277.1-201ENST00000429656 993 ntBASIC17.92■□□□□ 0.46
HOXA9P31269 TIMM8BP1-201ENST00000452384 211 ntBASIC17.92■□□□□ 0.46
HOXA9P31269 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.92■□□□□ 0.46
HOXA9P31269 AC109322.1-201ENST00000524499 1264 ntBASIC17.92■□□□□ 0.46
HOXA9P31269 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
HOXA9P31269 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.92■□□□□ 0.46
HOXA9P31269 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.92■□□□□ 0.46
HOXA9P31269 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXA9P31269 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.92■□□□□ 0.46
HOXA9P31269 MIR4515-201ENST00000584082 81 ntBASIC17.92■□□□□ 0.46
HOXA9P31269 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.92■□□□□ 0.46
HOXA9P31269 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HOXA9P31269 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.92■□□□□ 0.46
HOXA9P31269 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA9P31269 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA9P31269 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXA9P31269 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
HOXA9P31269 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA9P31269 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HOXA9P31269 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HOXA9P31269 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA9P31269 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA9P31269 AC135050.7-201ENST00000624508 2218 ntBASIC17.91■□□□□ 0.46
HOXA9P31269 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA9P31269 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HOXA9P31269 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA9P31269 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HOXA9P31269 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA9P31269 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.91■□□□□ 0.46
HOXA9P31269 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA9P31269 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA9P31269 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HOXA9P31269 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXA9P31269 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXA9P31269 AL096865.1-201ENST00000606796 927 ntBASIC17.91■□□□□ 0.46
HOXA9P31269 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA9P31269 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA9P31269 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA9P31269 ABALON-201ENST00000629058 1903 ntBASIC17.91■□□□□ 0.46
HOXA9P31269 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HOXA9P31269 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.91■□□□□ 0.46
HOXA9P31269 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.91■□□□□ 0.46
HOXA9P31269 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA9P31269 AKAP8P1-201ENST00000434743 1349 ntBASIC17.91■□□□□ 0.46
HOXA9P31269 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.91■□□□□ 0.46
HOXA9P31269 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA9P31269 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms