Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.14■□□□□ 0.65
SMPD1P17405 AL035633.1-201ENST00000406139 838 ntBASIC19.14■□□□□ 0.65
SMPD1P17405 FAM58DP-201ENST00000428076 619 ntBASIC19.14■□□□□ 0.65
SMPD1P17405 FAM86GP-201ENST00000448322 971 ntBASIC19.14■□□□□ 0.65
SMPD1P17405 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.14■□□□□ 0.65
SMPD1P17405 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMPD1P17405 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMPD1P17405 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.14■□□□□ 0.65
SMPD1P17405 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.14■□□□□ 0.65
SMPD1P17405 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMPD1P17405 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMPD1P17405 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMPD1P17405 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.14■□□□□ 0.65
SMPD1P17405 AL390955.2-201ENST00000603032 514 ntBASIC19.14■□□□□ 0.65
SMPD1P17405 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMPD1P17405 Z92544.3-201ENST00000624747 417 ntBASIC19.14■□□□□ 0.65
SMPD1P17405 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.14■□□□□ 0.65
SMPD1P17405 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
SMPD1P17405 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMPD1P17405 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.14■□□□□ 0.65
SMPD1P17405 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.14■□□□□ 0.65
SMPD1P17405 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SMPD1P17405 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SMPD1P17405 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMPD1P17405 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.13■□□□□ 0.65
SMPD1P17405 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 AL355312.1-201ENST00000407115 2176 ntBASIC19.13■□□□□ 0.65
SMPD1P17405 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SMPD1P17405 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SMPD1P17405 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SMPD1P17405 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 DUX4L17-201ENST00000557360 1267 ntBASIC19.13■□□□□ 0.65
SMPD1P17405 AL135744.1-201ENST00000565098 629 ntBASIC19.13■□□□□ 0.65
SMPD1P17405 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.13■□□□□ 0.65
SMPD1P17405 AC015911.4-201ENST00000588022 1070 ntBASIC19.13■□□□□ 0.65
SMPD1P17405 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SMPD1P17405 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.13■□□□□ 0.65
SMPD1P17405 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
SMPD1P17405 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.13■□□□□ 0.65
SMPD1P17405 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SMPD1P17405 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.13■□□□□ 0.65
SMPD1P17405 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.13■□□□□ 0.65
SMPD1P17405 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.13■□□□□ 0.65
SMPD1P17405 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
SMPD1P17405 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMPD1P17405 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SMPD1P17405 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMPD1P17405 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.12■□□□□ 0.65
SMPD1P17405 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMPD1P17405 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMPD1P17405 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMPD1P17405 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.12■□□□□ 0.65
SMPD1P17405 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMPD1P17405 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMPD1P17405 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.12■□□□□ 0.65
SMPD1P17405 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.12■□□□□ 0.65
SMPD1P17405 DUX4L27-201ENST00000554796 1261 ntBASIC19.12■□□□□ 0.65
SMPD1P17405 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
SMPD1P17405 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.12■□□□□ 0.65
SMPD1P17405 RARRES2P8-201ENST00000566335 367 ntBASIC19.12■□□□□ 0.65
SMPD1P17405 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.12■□□□□ 0.65
SMPD1P17405 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SMPD1P17405 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMPD1P17405 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.12■□□□□ 0.65
SMPD1P17405 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMPD1P17405 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMPD1P17405 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SMPD1P17405 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.11■□□□□ 0.65
SMPD1P17405 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMPD1P17405 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SMPD1P17405 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMPD1P17405 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMPD1P17405 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMPD1P17405 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMPD1P17405 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.11■□□□□ 0.65
SMPD1P17405 RN7SL589P-201ENST00000481268 310 ntBASIC19.11■□□□□ 0.65
SMPD1P17405 AC069335.1-201ENST00000489972 472 ntBASIC19.11■□□□□ 0.65
SMPD1P17405 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMPD1P17405 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.11■□□□□ 0.65
SMPD1P17405 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.11■□□□□ 0.65
SMPD1P17405 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.11■□□□□ 0.65
SMPD1P17405 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.11■□□□□ 0.65
SMPD1P17405 AC005412.3-201ENST00000580309 715 ntBASIC19.11■□□□□ 0.65
SMPD1P17405 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.11■□□□□ 0.65
SMPD1P17405 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMPD1P17405 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms