Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC079328.1-201ENST00000560358 952 ntBASIC15.92■□□□□ 0.14
CHD8Q9HCK8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 RPSAP52-203ENST00000622976 1023 ntBASIC15.92■□□□□ 0.14
CHD8Q9HCK8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHD8Q9HCK8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 GMCL1P1-201ENST00000463439 1581 ntBASIC15.91■□□□□ 0.14
CHD8Q9HCK8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 CTBP2P5-201ENST00000454986 1264 ntBASIC15.91■□□□□ 0.14
CHD8Q9HCK8 LDHBP1-201ENST00000455730 1119 ntBASIC15.91■□□□□ 0.14
CHD8Q9HCK8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 CLDN5-201ENST00000403084 2357 ntBASIC15.91■□□□□ 0.14
CHD8Q9HCK8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CHD8Q9HCK8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 AC092978.1-202ENST00000637590 1327 ntBASIC15.9■□□□□ 0.14
CHD8Q9HCK8 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 MIR4722-201ENST00000578292 60 ntBASIC15.9■□□□□ 0.14
CHD8Q9HCK8 MIR3615-201ENST00000581999 87 ntBASIC15.9■□□□□ 0.14
CHD8Q9HCK8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 AC016629.1-201ENST00000596579 586 ntBASIC15.9■□□□□ 0.14
CHD8Q9HCK8 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD8Q9HCK8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
CHD8Q9HCK8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
CHD8Q9HCK8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 NUS1P3-201ENST00000423502 862 ntBASIC15.89■□□□□ 0.13
CHD8Q9HCK8 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 RPS2P36-201ENST00000456516 831 ntBASIC15.89■□□□□ 0.13
CHD8Q9HCK8 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms