Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
AP3S1Q92572 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.33■□□□□ 0.04
AP3S1Q92572 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
AP3S1Q92572 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S1Q92572 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S1Q92572 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S1Q92572 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
AP3S1Q92572 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S1Q92572 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S1Q92572 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
AP3S1Q92572 AL353807.1-201ENST00000427475 662 ntBASIC15.33■□□□□ 0.04
AP3S1Q92572 CROCCP5-201ENST00000436658 830 ntBASIC15.33■□□□□ 0.04
AP3S1Q92572 AL355355.2-201ENST00000442321 338 ntBASIC15.33■□□□□ 0.04
AP3S1Q92572 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
AP3S1Q92572 AC006970.2-201ENST00000450065 779 ntBASIC15.33■□□□□ 0.04
AP3S1Q92572 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.33■□□□□ 0.04
AP3S1Q92572 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.33■□□□□ 0.04
AP3S1Q92572 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
AP3S1Q92572 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S1Q92572 AP000692.2-201ENST00000608391 879 ntBASIC15.33■□□□□ 0.04
AP3S1Q92572 AC069544.1-201ENST00000609399 999 ntBASIC15.33■□□□□ 0.04
AP3S1Q92572 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
AP3S1Q92572 AL023875.1-201ENST00000640777 796 ntBASIC15.33■□□□□ 0.04
AP3S1Q92572 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
AP3S1Q92572 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.33■□□□□ 0.04
AP3S1Q92572 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S1Q92572 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S1Q92572 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S1Q92572 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S1Q92572 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.33■□□□□ 0.04
AP3S1Q92572 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.33■□□□□ 0.04
AP3S1Q92572 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S1Q92572 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S1Q92572 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
AP3S1Q92572 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.33■□□□□ 0.04
AP3S1Q92572 AC005052.1-201ENST00000625181 2492 ntBASIC15.33■□□□□ 0.04
AP3S1Q92572 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S1Q92572 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
AP3S1Q92572 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S1Q92572 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
AP3S1Q92572 AL662844.4-201ENST00000606367 2838 ntBASIC15.32■□□□□ 0.04
AP3S1Q92572 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
AP3S1Q92572 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S1Q92572 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.32■□□□□ 0.04
AP3S1Q92572 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S1Q92572 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
AP3S1Q92572 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
AP3S1Q92572 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S1Q92572 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S1Q92572 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S1Q92572 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S1Q92572 TSPY6P-201ENST00000448518 926 ntBASIC15.32■□□□□ 0.04
AP3S1Q92572 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.32■□□□□ 0.04
AP3S1Q92572 AL138781.1-201ENST00000566567 1274 ntBASIC15.32■□□□□ 0.04
AP3S1Q92572 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.32■□□□□ 0.04
AP3S1Q92572 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.32■□□□□ 0.04
AP3S1Q92572 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.32■□□□□ 0.04
AP3S1Q92572 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S1Q92572 MIR6786-201ENST00000616843 113 ntBASIC15.32■□□□□ 0.04
AP3S1Q92572 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.32■□□□□ 0.04
AP3S1Q92572 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.32■□□□□ 0.04
AP3S1Q92572 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.32■□□□□ 0.04
AP3S1Q92572 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.32■□□□□ 0.04
AP3S1Q92572 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
AP3S1Q92572 AC096733.2-201ENST00000609937 1394 ntBASIC15.32■□□□□ 0.04
AP3S1Q92572 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
AP3S1Q92572 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
AP3S1Q92572 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.32■□□□□ 0.04
AP3S1Q92572 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S1Q92572 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.32■□□□□ 0.04
AP3S1Q92572 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S1Q92572 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.32■□□□□ 0.04
AP3S1Q92572 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.32■□□□□ 0.04
AP3S1Q92572 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.32■□□□□ 0.04
AP3S1Q92572 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S1Q92572 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
AP3S1Q92572 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S1Q92572 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S1Q92572 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
AP3S1Q92572 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.31■□□□□ 0.04
AP3S1Q92572 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.31■□□□□ 0.04
AP3S1Q92572 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
AP3S1Q92572 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.31■□□□□ 0.04
AP3S1Q92572 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.31■□□□□ 0.04
AP3S1Q92572 AC092053.1-201ENST00000605787 1936 ntBASIC15.31■□□□□ 0.04
AP3S1Q92572 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
AP3S1Q92572 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 GUSBP6-202ENST00000438529 1198 ntBASIC15.31■□□□□ 0.04
AP3S1Q92572 B3GAT3P1-201ENST00000471720 806 ntBASIC15.31■□□□□ 0.04
AP3S1Q92572 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.31■□□□□ 0.04
AP3S1Q92572 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.31■□□□□ 0.04
AP3S1Q92572 AC124947.2-201ENST00000547118 1133 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms