Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 KRT18P2-201ENST00000447938 1258 ntBASIC20.88■□□□□ 0.93
RFX7Q2KHR2 IGHV3-65-201ENST00000523210 341 ntBASIC20.88■□□□□ 0.93
RFX7Q2KHR2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 AC002347.1-201ENST00000569543 541 ntBASIC20.88■□□□□ 0.93
RFX7Q2KHR2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX7Q2KHR2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 LINC00982-205ENST00000420957 435 ntBASIC20.87■□□□□ 0.93
RFX7Q2KHR2 AC008667.4-201ENST00000607370 168 ntBASIC20.87■□□□□ 0.93
RFX7Q2KHR2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFX7Q2KHR2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 RPS15P9-201ENST00000494093 319 ntBASIC20.86■□□□□ 0.93
RFX7Q2KHR2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 AC097637.2-201ENST00000624096 1997 ntBASIC20.86■□□□□ 0.93
RFX7Q2KHR2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.86■□□□□ 0.93
RFX7Q2KHR2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 IGLL3P-201ENST00000412472 434 ntBASIC20.85■□□□□ 0.93
RFX7Q2KHR2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms