Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Shox2P70390 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.23□□□□□ -0.13
Shox2P70390 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Shox2P70390 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Shox2P70390 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Shox2P70390 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.23□□□□□ -0.13
Shox2P70390 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Shox2P70390 Gm10013-201ENSMUST00000106074 672 ntBASIC14.23□□□□□ -0.13
Shox2P70390 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.23□□□□□ -0.13
Shox2P70390 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.23□□□□□ -0.13
Shox2P70390 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Shox2P70390 Gm27646-201ENSMUST00000183989 110 ntBASIC14.23□□□□□ -0.13
Shox2P70390 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.23□□□□□ -0.13
Shox2P70390 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.23□□□□□ -0.13
Shox2P70390 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Shox2P70390 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Shox2P70390 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.22□□□□□ -0.13
Shox2P70390 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Shox2P70390 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Shox2P70390 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Shox2P70390 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.22□□□□□ -0.13
Shox2P70390 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Shox2P70390 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.22□□□□□ -0.13
Shox2P70390 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Shox2P70390 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.22□□□□□ -0.13
Shox2P70390 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Shox2P70390 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.22□□□□□ -0.13
Shox2P70390 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.22□□□□□ -0.13
Shox2P70390 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Shox2P70390 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.22□□□□□ -0.13
Shox2P70390 Gm5587-201ENSMUST00000206270 674 ntBASIC14.22□□□□□ -0.13
Shox2P70390 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.22□□□□□ -0.13
Shox2P70390 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Shox2P70390 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.22□□□□□ -0.13
Shox2P70390 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.22□□□□□ -0.13
Shox2P70390 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.22□□□□□ -0.13
Shox2P70390 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Shox2P70390 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Shox2P70390 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Shox2P70390 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shox2P70390 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Shox2P70390 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.21□□□□□ -0.13
Shox2P70390 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shox2P70390 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Shox2P70390 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shox2P70390 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.21□□□□□ -0.13
Shox2P70390 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shox2P70390 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shox2P70390 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Shox2P70390 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shox2P70390 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms