Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.7■□□□□ 0.1
SUMO3P55854 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.7■□□□□ 0.1
SUMO3P55854 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.7■□□□□ 0.1
SUMO3P55854 AC124947.2-201ENST00000547118 1133 ntBASIC15.7■□□□□ 0.1
SUMO3P55854 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.7■□□□□ 0.1
SUMO3P55854 AC021087.4-201ENST00000563761 564 ntBASIC15.7■□□□□ 0.1
SUMO3P55854 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
SUMO3P55854 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.7■□□□□ 0.1
SUMO3P55854 AC006557.2-201ENST00000592985 1240 ntBASIC15.7■□□□□ 0.1
SUMO3P55854 AC064862.7-201ENST00000604520 867 ntBASIC15.7■□□□□ 0.1
SUMO3P55854 AC025062.2-201ENST00000605477 670 ntBASIC15.7■□□□□ 0.1
SUMO3P55854 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.7■□□□□ 0.1
SUMO3P55854 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
SUMO3P55854 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SUMO3P55854 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 GPR89P-201ENST00000407924 1495 ntBASIC15.7■□□□□ 0.1
SUMO3P55854 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.7■□□□□ 0.1
SUMO3P55854 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SUMO3P55854 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.7■□□□□ 0.1
SUMO3P55854 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.7■□□□□ 0.1
SUMO3P55854 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.7■□□□□ 0.1
SUMO3P55854 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.7■□□□□ 0.1
SUMO3P55854 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.7■□□□□ 0.1
SUMO3P55854 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SUMO3P55854 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SUMO3P55854 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.69■□□□□ 0.1
SUMO3P55854 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SUMO3P55854 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SUMO3P55854 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SUMO3P55854 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SUMO3P55854 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SUMO3P55854 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.69■□□□□ 0.1
SUMO3P55854 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.69■□□□□ 0.1
SUMO3P55854 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.69■□□□□ 0.1
SUMO3P55854 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SUMO3P55854 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SUMO3P55854 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SUMO3P55854 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SUMO3P55854 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SUMO3P55854 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.69■□□□□ 0.1
SUMO3P55854 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.69■□□□□ 0.1
SUMO3P55854 AF186996.4-201ENST00000467186 377 ntBASIC15.69■□□□□ 0.1
SUMO3P55854 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.69■□□□□ 0.1
SUMO3P55854 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SUMO3P55854 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SUMO3P55854 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.69■□□□□ 0.1
SUMO3P55854 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SUMO3P55854 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SUMO3P55854 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SUMO3P55854 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SUMO3P55854 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.69■□□□□ 0.1
SUMO3P55854 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SUMO3P55854 AC026471.1-201ENST00000564629 3026 ntBASIC15.69■□□□□ 0.1
SUMO3P55854 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.69■□□□□ 0.1
SUMO3P55854 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SUMO3P55854 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SUMO3P55854 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
SUMO3P55854 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.69■□□□□ 0.1
SUMO3P55854 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SUMO3P55854 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SUMO3P55854 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SUMO3P55854 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.68■□□□□ 0.1
SUMO3P55854 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SUMO3P55854 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SUMO3P55854 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SUMO3P55854 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SUMO3P55854 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SUMO3P55854 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SUMO3P55854 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.68■□□□□ 0.1
SUMO3P55854 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.68■□□□□ 0.1
SUMO3P55854 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.68■□□□□ 0.1
SUMO3P55854 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.68■□□□□ 0.1
SUMO3P55854 TPM4P1-201ENST00000436100 807 ntBASIC15.68■□□□□ 0.1
SUMO3P55854 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.68■□□□□ 0.1
SUMO3P55854 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SUMO3P55854 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.68■□□□□ 0.1
SUMO3P55854 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.68■□□□□ 0.1
SUMO3P55854 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SUMO3P55854 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.68■□□□□ 0.1
SUMO3P55854 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.68■□□□□ 0.1
SUMO3P55854 AC004706.3-202ENST00000621574 984 ntBASIC15.68■□□□□ 0.1
SUMO3P55854 AC107918.4-202ENST00000641623 219 ntBASIC15.68■□□□□ 0.1
SUMO3P55854 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SUMO3P55854 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SUMO3P55854 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms